The 2.0 version of rSNPBase

Variant report

Variant rs138285354
Chromosome Location chr6:44528793-44528794
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:44523000-44531000 Weak transcription Ovary ovary
2 chr6:44524000-44531000 Weak transcription Gastric stomach
3 chr6:44525000-44529200 Enhancers Pancreas Pancrea
4 chr6:44526200-44528800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr6:44526600-44531000 Weak transcription Right Atrium heart
6 chr6:44527000-44528800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr6:44527600-44528800 Weak transcription Fetal Brain Male brain
8 chr6:44527600-44529000 Enhancers H1 Cell Line embryonic stem cell
9 chr6:44527600-44535400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:44527800-44528800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr6:44527800-44528800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr6:44527800-44529000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr6:44527800-44529000 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr6:44528000-44529600 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr6:44528000-44532600 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr6:44528400-44528800 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr6:44528400-44528800 Enhancers ES-WA7 Cell Line embryonic stem cell
18 chr6:44528400-44529000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
19 chr6:44528400-44529400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
20 chr6:44528600-44528800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr6:44528600-44528800 Bivalent Enhancer Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr6:44528600-44528800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr6:44528600-44528800 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr6:44528600-44528800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr6:44528600-44528800 Bivalent Enhancer Brain Cingulate Gyrus brain
26 chr6:44528600-44528800 Bivalent Enhancer Fetal Intestine Small intestine
27 chr6:44528600-44528800 Flanking Active TSS Psoas Muscle Psoas
28 chr6:44528600-44529000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
29 chr6:44528600-44529000 Bivalent Enhancer Primary monocytes fromperipheralblood blood
30 chr6:44528600-44529000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
31 chr6:44528600-44529000 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
32 chr6:44528600-44529000 Bivalent Enhancer Fetal Muscle Leg muscle
33 chr6:44528600-44529000 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
34 chr6:44528600-44529000 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
35 chr6:44528600-44529000 Bivalent Enhancer NHEK skin
36 chr6:44528600-44529000 Flanking Bivalent TSS/Enh Osteobl bone
37 chr6:44528600-44529200 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr6:44528600-44529200 Bivalent Enhancer Fetal Stomach stomach
39 chr6:44528600-44529200 Bivalent Enhancer Dnd41 blood
40 chr6:44528600-44529400 Enhancers HUES64 Cell Line embryonic stem cell
41 chr6:44528600-44529400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr6:44528600-44529400 Bivalent Enhancer Fetal Muscle Trunk muscle
43 chr6:44528600-44529800 Enhancers Primary hematopoietic stem cells blood
44 chr6:44528600-44529800 Enhancers Fetal Lung lung
45 chr6:44528600-44530200 Enhancers Fetal Thymus thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015