Variant report

Variant	rs138312680
Chromosome Location	chr12:119566520-119566521
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047036	chr12:119477583-119992640	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	esv3324701	chr12:119565769-119570267	Strong transcription ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119535200-119568800	Weak transcription	Fetal Brain Male	brain
2	chr12:119553600-119567600	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr12:119553800-119569000	Weak transcription	Brain Angular Gyrus	brain
4	chr12:119560600-119567000	Strong transcription	Brain Germinal Matrix	brain
5	chr12:119561000-119568000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr12:119563800-119568000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr12:119566000-119569200	Strong transcription	Fetal Brain Female	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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