Variant report

Variant	rs138376476
Chromosome Location	chr2:182938495-182938496
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875477	chr2:182938377-183086478	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:182929400-182942600	Weak transcription	Left Ventricle	heart
2	chr2:182929600-182942200	Weak transcription	Fetal Heart	heart
3	chr2:182933200-182942400	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr2:182934000-182940200	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr2:182934000-182944800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr2:182934200-182942200	Weak transcription	HUVEC	blood vessel
7	chr2:182934200-182943800	Weak transcription	Stomach Mucosa	stomach
8	chr2:182934800-182941400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr2:182935200-182940400	Weak transcription	Hela-S3	cervix
10	chr2:182937600-182938600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr2:182937600-182938800	Enhancers	HepG2	liver
12	chr2:182938000-182938600	Enhancers	Liver	Liver
13	chr2:182938000-182942600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr2:182938200-182940000	Weak transcription	Osteobl	bone
15	chr2:182938400-182938600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr2:182938400-182938600	Enhancers	Sigmoid Colon	Sigmoid Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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