The 2.0 version of rSNPBase

Variant report

Variant rs138598105
Chromosome Location chr7:129300423-129300424
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:129283800-129331600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr7:129286600-129301600 Weak transcription HSMMtube muscle
3 chr7:129286800-129304400 Weak transcription NHLF lung
4 chr7:129287200-129301600 Weak transcription Psoas Muscle Psoas
5 chr7:129289200-129314000 Weak transcription Fetal Brain Male brain
6 chr7:129290000-129325800 Weak transcription Stomach Mucosa stomach
7 chr7:129290400-129304600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr7:129293600-129301600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr7:129293800-129311200 Weak transcription Brain Anterior Caudate brain
10 chr7:129293800-129311400 Weak transcription Brain Angular Gyrus brain
11 chr7:129296600-129301600 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr7:129296800-129300600 Strong transcription Primary T helper 17 cells PMA-I stimulated --
13 chr7:129296800-129300600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr7:129296800-129301400 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr7:129297000-129300600 Strong transcription Primary T helper cells PMA-I stimulated --
16 chr7:129297000-129300800 Strong transcription Duodenum Mucosa Duodenum
17 chr7:129297000-129301000 Strong transcription Primary T cells fromperipheralblood blood
18 chr7:129297000-129301000 Strong transcription Osteobl bone
19 chr7:129297000-129301600 Strong transcription Fetal Lung lung
20 chr7:129297000-129301600 Strong transcription Skeletal Muscle Female skeletal muscle
21 chr7:129297000-129302200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr7:129297000-129302200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr7:129297000-129302200 Strong transcription Rectal Mucosa Donor 31 rectum
24 chr7:129297200-129300600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr7:129297200-129300600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr7:129297200-129300800 Strong transcription Liver Liver
27 chr7:129297200-129300800 Strong transcription HepG2 liver
28 chr7:129297200-129301000 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr7:129297200-129301400 Strong transcription Ovary ovary
30 chr7:129297200-129301600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr7:129297200-129301800 Strong transcription Adipose Nuclei Adipose
32 chr7:129297200-129302000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr7:129297200-129302000 Strong transcription Rectal Mucosa Donor 29 rectum
34 chr7:129297200-129302200 Strong transcription Primary T helper naive cells from peripheral blood blood
35 chr7:129297200-129302200 Strong transcription Primary T helper naive cells fromperipheralblood blood
36 chr7:129297200-129302200 Strong transcription Stomach Smooth Muscle stomach
37 chr7:129297200-129302400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
38 chr7:129297200-129302600 ZNF genes & repeats Dnd41 blood
39 chr7:129297200-129303200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr7:129297400-129300600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr7:129297400-129301000 Strong transcription Duodenum Smooth Muscle Duodenum
42 chr7:129297400-129302000 Strong transcription Rectal Smooth Muscle rectum
43 chr7:129297600-129300800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr7:129297600-129302600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr7:129297800-129300600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr7:129297800-129300800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr7:129297800-129349800 Weak transcription Small Intestine intestine
48 chr7:129298000-129304400 Weak transcription NHDF-Ad bronchial
49 chr7:129298200-129301600 Strong transcription Brain Hippocampus Middle brain
50 chr7:129298200-129302200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015