Variant report

Variant	rs138656468
Chromosome Location	chr13:97636110-97636111
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832693	chr13:97594845-97777481	Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	esv3380074	chr13:97635686-97636265	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97630800-97646000	Weak transcription	Esophagus	oesophagus
2	chr13:97634200-97636200	Enhancers	Adipose Nuclei	Adipose
3	chr13:97634200-97636200	Enhancers	HUVEC	blood vessel
4	chr13:97634600-97636200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
5	chr13:97634600-97637200	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr13:97634800-97636200	Enhancers	Primary hematopoietic stem cells	blood
7	chr13:97634800-97636600	Enhancers	Primary B cells from cord blood	blood
8	chr13:97635000-97636200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr13:97635000-97636400	Weak transcription	Brain Hippocampus Middle	brain
10	chr13:97635200-97636400	Weak transcription	NHEK	skin
11	chr13:97635400-97636600	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
12	chr13:97635400-97639000	Weak transcription	Gastric	stomach
13	chr13:97635600-97636600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr13:97635600-97637000	Enhancers	Fetal Intestine Large	intestine
15	chr13:97635600-97637000	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr13:97635800-97636600	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr13:97635800-97636800	Active TSS	Pancreatic Islets	Pancreatic Islet
18	chr13:97636000-97636200	Enhancers	iPS-18 Cell Line	embryonic stem cell
19	chr13:97636000-97636200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr13:97636000-97636200	Enhancers	Duodenum Mucosa	Duodenum
21	chr13:97636000-97636200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr13:97636000-97636200	Enhancers	Rectal Mucosa Donor 31	rectum
23	chr13:97636000-97636200	Enhancers	Rectal Smooth Muscle	rectum
24	chr13:97636000-97636800	Enhancers	Stomach Mucosa	stomach
25	chr13:97636000-97637000	Enhancers	Fetal Kidney	kidney
26	chr13:97636000-97637000	Active TSS	Rectal Mucosa Donor 29	rectum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links