Variant report

Variant	rs138727612
Chromosome Location	chr7:137530907-137530908
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv831150	chr7:137500559-137652808	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	esv3406613	chr7:137530437-137532985	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
4	esv3342190	chr7:137530512-137532910	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:66 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137527200-137532600	Active TSS	Brain Anterior Caudate	brain
2	chr7:137528600-137532800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
3	chr7:137528800-137532800	Active TSS	Brain Inferior Temporal Lobe	brain
4	chr7:137529400-137531200	Flanking Active TSS	Muscle Satellite Cultured Cells	--
5	chr7:137529600-137531200	Flanking Active TSS	Fetal Brain Male	brain
6	chr7:137529800-137531000	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr7:137530400-137531000	Bivalent Enhancer	Adipose Nuclei	Adipose
8	chr7:137530400-137531000	Flanking Active TSS	Brain Hippocampus Middle	brain
9	chr7:137530400-137531000	Bivalent Enhancer	Fetal Muscle Leg	muscle
10	chr7:137530400-137531000	Enhancers	Gastric	stomach
11	chr7:137530400-137531000	Flanking Active TSS	HSMMtube	muscle
12	chr7:137530400-137531200	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr7:137530400-137531200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr7:137530400-137531200	Flanking Active TSS	Brain Substantia Nigra	brain
15	chr7:137530400-137531200	Flanking Active TSS	Osteobl	bone
16	chr7:137530400-137531800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
17	chr7:137530400-137531800	Active TSS	NH-A	brain
18	chr7:137530400-137532800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr7:137530600-137531000	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
20	chr7:137530600-137531000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr7:137530600-137531000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr7:137530600-137531000	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
23	chr7:137530600-137531200	Flanking Bivalent TSS/Enh	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr7:137530600-137531800	Bivalent/Poised TSS	GM12878-XiMat	blood
25	chr7:137530600-137532400	Active TSS	HSMM	muscle
26	chr7:137530800-137531000	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
27	chr7:137530800-137531000	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr7:137530800-137531000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr7:137530800-137531000	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr7:137530800-137531000	Bivalent Enhancer	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr7:137530800-137531000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr7:137530800-137531000	Flanking Bivalent TSS/Enh	Primary T helper naive cells fromperipheralblood	blood
33	chr7:137530800-137531000	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
34	chr7:137530800-137531000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
35	chr7:137530800-137531000	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr7:137530800-137531000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr7:137530800-137531000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr7:137530800-137531000	Active TSS	Brain Germinal Matrix	brain
39	chr7:137530800-137531000	Bivalent Enhancer	Colon Smooth Muscle	Colon
40	chr7:137530800-137531000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
41	chr7:137530800-137531000	Bivalent Enhancer	Fetal Intestine Small	intestine
42	chr7:137530800-137531000	Enhancers	Right Ventricle	heart
43	chr7:137530800-137531000	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
44	chr7:137530800-137531000	Bivalent Enhancer	Stomach Smooth Muscle	stomach
45	chr7:137530800-137531000	Bivalent Enhancer	HepG2	liver
46	chr7:137530800-137531000	Enhancers	NHDF-Ad	bronchial
47	chr7:137530800-137531200	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
48	chr7:137530800-137531200	Bivalent Enhancer	Primary B cells from peripheral blood	blood
49	chr7:137530800-137531200	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
50	chr7:137530800-137531200	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain

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