Variant report

Variant rs138779407
Chromosome Location chr1:155176869-155176870
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:155163600-155177400 Weak transcription Small Intestine intestine
2 chr1:155165400-155177000 Weak transcription Thymus Thymus
3 chr1:155167000-155177200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:155171400-155177000 Weak transcription Aorta Aorta
5 chr1:155175000-155177000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr1:155176200-155177000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:155176200-155177000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr1:155176200-155178400 Flanking Active TSS Stomach Smooth Muscle stomach
9 chr1:155176400-155177400 Enhancers Fetal Brain Male brain
10 chr1:155176400-155177400 Enhancers Fetal Heart heart
11 chr1:155176400-155178000 Enhancers Placenta Placenta
12 chr1:155176400-155178400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr1:155176400-155179600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr1:155176600-155177000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:155176600-155177000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:155176600-155177000 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr1:155176600-155177000 Enhancers Fetal Intestine Large intestine
18 chr1:155176600-155177200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
19 chr1:155176600-155177200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:155176600-155177600 Flanking Active TSS Brain Germinal Matrix brain
21 chr1:155176600-155177600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
22 chr1:155176600-155177600 Flanking Active TSS HSMMtube muscle
23 chr1:155176600-155177800 Enhancers Primary monocytes fromperipheralblood blood
24 chr1:155176600-155177800 Enhancers Primary B cells from cord blood blood
25 chr1:155176600-155178000 Enhancers Primary B cells from peripheral blood blood
26 chr1:155176600-155178000 Enhancers Primary T cells fromperipheralblood blood
27 chr1:155176600-155178000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr1:155176600-155178000 Enhancers Liver Liver
29 chr1:155176600-155178000 Enhancers Fetal Thymus thymus
30 chr1:155176600-155178000 Enhancers Pancreas Pancrea
31 chr1:155176600-155178000 Enhancers GM12878-XiMat blood
32 chr1:155176600-155178400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
33 chr1:155176600-155178400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr1:155176600-155178400 Flanking Active TSS Muscle Satellite Cultured Cells --
35 chr1:155176600-155178400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
36 chr1:155176600-155178400 Flanking Active TSS Fetal Muscle Trunk muscle
37 chr1:155176600-155178400 Flanking Active TSS Fetal Muscle Leg muscle
38 chr1:155176600-155178400 Flanking Active TSS Rectal Smooth Muscle rectum
39 chr1:155176600-155178400 Flanking Active TSS NHLF lung
40 chr1:155176600-155178400 Flanking Active TSS Osteobl bone
41 chr1:155176600-155180000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:155176600-155180200 Active TSS ES-I3 Cell Line embryonic stem cell
43 chr1:155176800-155177000 Flanking Active TSS H1 Cell Line embryonic stem cell
44 chr1:155176800-155177000 Flanking Active TSS H9 Cell Line embryonic stem cell
45 chr1:155176800-155177000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
46 chr1:155176800-155177000 Active TSS iPS-18 Cell Line embryonic stem cell
47 chr1:155176800-155177000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:155176800-155177000 Active TSS Breast Myoepithelial Primary Cells Breast
49 chr1:155176800-155177000 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr1:155176800-155177000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links