Variant report

Variant	rs138889487
Chromosome Location	chr1:84311078-84311079
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv523508	chr1:84310193-84314754	Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84281400-84316600	Weak transcription	Pancreas	Pancrea
2	chr1:84297600-84313000	Weak transcription	Aorta	Aorta
3	chr1:84306000-84311200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr1:84310200-84311200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr1:84310200-84311200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:84310400-84311400	Strong transcription	Primary T cells from cord blood	blood
7	chr1:84310800-84312200	Enhancers	Liver	Liver
8	chr1:84310800-84312200	Enhancers	Fetal Intestine Small	intestine
9	chr1:84310800-84324400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr1:84311000-84311200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr1:84311000-84311200	Enhancers	Small Intestine	intestine
12	chr1:84311000-84311400	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr1:84311000-84311800	Enhancers	Duodenum Mucosa	Duodenum
14	chr1:84311000-84312200	Enhancers	Adipose Nuclei	Adipose
15	chr1:84311000-84314200	Enhancers	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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