Variant report
| Variant | rs1390537 |
|---|---|
| Chromosome Location | chr12:29305341-29305342 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:29302600-29306800 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 2 | chr12:29303000-29305600 | Weak transcription | Brain Substantia Nigra | brain |
| 3 | chr12:29303200-29305800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 4 | chr12:29303200-29305800 | Weak transcription | Right Atrium | heart |
| 5 | chr12:29303200-29306200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 6 | chr12:29303200-29306200 | Weak transcription | Thymus | Thymus |
| 7 | chr12:29303200-29307600 | Weak transcription | Placenta | Placenta |
| 8 | chr12:29303200-29308200 | Weak transcription | Left Ventricle | heart |
| 9 | chr12:29303200-29309800 | Weak transcription | NHDF-Ad | bronchial |
| 10 | chr12:29303400-29305400 | Weak transcription | Brain Hippocampus Middle | brain |
| 11 | chr12:29303400-29305400 | Weak transcription | Colon Smooth Muscle | Colon |
| 12 | chr12:29303400-29305400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 13 | chr12:29303400-29305800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 14 | chr12:29303400-29305800 | Weak transcription | Fetal Muscle Leg | muscle |
| 15 | chr12:29303400-29305800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr12:29303400-29305800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 17 | chr12:29303400-29306200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 18 | chr12:29303400-29306400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 19 | chr12:29303400-29306800 | Enhancers | Small Intestine | intestine |
| 20 | chr12:29303400-29307000 | Enhancers | Fetal Intestine Large | intestine |
| 21 | chr12:29303400-29308000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 22 | chr12:29303400-29308200 | Weak transcription | Right Ventricle | heart |
| 23 | chr12:29303400-29309000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 24 | chr12:29303400-29309800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 25 | chr12:29303400-29311400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 26 | chr12:29303400-29312200 | Weak transcription | Spleen | Spleen |
| 27 | chr12:29303400-29316600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 28 | chr12:29303400-29317000 | Weak transcription | Colonic Mucosa | Colon |
| 29 | chr12:29303400-29317800 | Weak transcription | Fetal Kidney | kidney |
| 30 | chr12:29303600-29305400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 31 | chr12:29303600-29305400 | Weak transcription | Brain Angular Gyrus | brain |
| 32 | chr12:29303600-29305400 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 33 | chr12:29303600-29305800 | Weak transcription | Brain Germinal Matrix | brain |
| 34 | chr12:29303600-29308000 | Weak transcription | NH-A | brain |
| 35 | chr12:29303600-29308800 | Enhancers | Dnd41 | blood |
| 36 | chr12:29303600-29313400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 37 | chr12:29303800-29305600 | Weak transcription | Fetal Brain Female | brain |
| 38 | chr12:29303800-29305800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 39 | chr12:29303800-29310200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 40 | chr12:29304000-29305400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 41 | chr12:29304000-29305400 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 42 | chr12:29304000-29312600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 43 | chr12:29304200-29305400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 44 | chr12:29304200-29305400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 45 | chr12:29304200-29305400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 46 | chr12:29304200-29305600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr12:29304200-29307000 | Enhancers | Fetal Intestine Small | intestine |
| 48 | chr12:29304200-29308000 | Weak transcription | K562 | blood |
| 49 | chr12:29304400-29305600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 50 | chr12:29304400-29305800 | Weak transcription | Fetal Brain Male | brain |
