Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11098581	0.89[EUR][1000 genomes]
rs11729301	0.90[CEU][hapmap];0.90[EUR][1000 genomes]
rs12642805	0.81[EUR][1000 genomes]
rs1496253	0.89[EUR][1000 genomes]
rs1496268	0.88[EUR][1000 genomes]
rs1496270	0.94[EUR][1000 genomes]
rs1496271	0.88[EUR][1000 genomes]
rs1496272	0.89[EUR][1000 genomes]
rs1496273	0.89[EUR][1000 genomes]
rs1496276	1.00[CHB][hapmap];0.95[JPT][hapmap];0.96[ASN][1000 genomes]
rs1496277	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1603393	0.87[EUR][1000 genomes]
rs1826805	0.95[EUR][1000 genomes]
rs1826807	0.90[EUR][1000 genomes]
rs1826809	0.89[EUR][1000 genomes]
rs28594189	0.89[EUR][1000 genomes]
rs34246665	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4833173	0.95[EUR][1000 genomes]
rs7658066	0.89[EUR][1000 genomes]
rs766624	0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879852	chr4:121108734-121768496	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv998094	chr4:121504565-122374203	Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
3	nsv1004485	chr4:121542992-121716769	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv916737	chr4:121589793-121748847	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:121591200-121620600	Weak transcription	Left Ventricle	heart
2	chr4:121604400-121612400	Weak transcription	Osteobl	bone
3	chr4:121605000-121612800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr4:121610200-121624600	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr4:121612200-121612600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr4:121612200-121614400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr4:121612200-121617000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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