The 2.0 version of rSNPBase

Variant report

Variant rs139070809
Chromosome Location chr3:42826933-42826934
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:42814800-42840800 Weak transcription Spleen Spleen
2 chr3:42815000-42834800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:42815200-42827000 Weak transcription Fetal Lung lung
4 chr3:42815200-42828200 Weak transcription Fetal Intestine Small intestine
5 chr3:42815200-42834800 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr3:42815200-42834800 Weak transcription H9 Cell Line embryonic stem cell
7 chr3:42815200-42834800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr3:42815200-42834800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr3:42815200-42834800 Weak transcription Fetal Muscle Leg muscle
10 chr3:42815200-42834800 Weak transcription Ovary ovary
11 chr3:42815200-42834800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr3:42815200-42834800 Weak transcription A549 lung
13 chr3:42815200-42835200 Weak transcription Right Ventricle heart
14 chr3:42815200-42836400 Weak transcription Brain Hippocampus Middle brain
15 chr3:42815200-42837400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr3:42815200-42842000 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr3:42815200-42842200 Weak transcription Aorta Aorta
18 chr3:42815200-42842400 Weak transcription Psoas Muscle Psoas
19 chr3:42815400-42827400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr3:42815400-42827600 Weak transcription Primary B cells from cord blood blood
21 chr3:42815400-42832400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr3:42815400-42833600 Weak transcription Rectal Smooth Muscle rectum
23 chr3:42815400-42834400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr3:42815400-42834800 Weak transcription Brain Germinal Matrix brain
25 chr3:42815400-42837200 Weak transcription Brain Cingulate Gyrus brain
26 chr3:42815400-42844000 Weak transcription NHDF-Ad bronchial
27 chr3:42815600-42827600 Weak transcription Primary hematopoietic stem cells blood
28 chr3:42815600-42841800 Weak transcription Thymus Thymus
29 chr3:42815600-42842000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr3:42815600-42842000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr3:42816200-42837600 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr3:42820400-42834800 Weak transcription HSMMtube muscle
33 chr3:42821400-42828400 Strong transcription Dnd41 blood
34 chr3:42821400-42837400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr3:42821800-42827000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr3:42821800-42834800 Weak transcription Esophagus oesophagus
37 chr3:42821800-42834800 Weak transcription Pancreas Pancrea
38 chr3:42822000-42841200 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr3:42822400-42834800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr3:42822400-42834800 Weak transcription NHLF lung
41 chr3:42822400-42837200 Weak transcription Brain Angular Gyrus brain
42 chr3:42822400-42843400 Weak transcription Small Intestine intestine
43 chr3:42822800-42827000 Weak transcription Muscle Satellite Cultured Cells --
44 chr3:42822800-42827000 Weak transcription Colon Smooth Muscle Colon
45 chr3:42822800-42827600 Weak transcription Stomach Mucosa stomach
46 chr3:42822800-42830000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr3:42822800-42834800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr3:42822800-42837000 Weak transcription Brain Anterior Caudate brain
49 chr3:42822800-42841600 Weak transcription Brain Substantia Nigra brain
50 chr3:42822800-42842800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015