The 2.0 version of rSNPBase

Variant report

Variant rs139080524
Chromosome Location chr1:10309613-10309614
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10272600-10368200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:10276800-10311800 Weak transcription Hela-S3 cervix
3 chr1:10277000-10322000 Weak transcription Spleen Spleen
4 chr1:10284800-10311000 Weak transcription Small Intestine intestine
5 chr1:10285200-10316000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:10285400-10310800 Weak transcription Aorta Aorta
7 chr1:10285400-10312600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:10287400-10312400 Weak transcription Pancreas Pancrea
9 chr1:10289200-10317400 Weak transcription Liver Liver
10 chr1:10291000-10311800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:10291000-10311800 Weak transcription HMEC breast
12 chr1:10291200-10311200 Weak transcription HUVEC blood vessel
13 chr1:10293000-10322000 Weak transcription Primary T cells from cord blood blood
14 chr1:10293600-10311400 Weak transcription NH-A brain
15 chr1:10295000-10310600 Weak transcription Stomach Smooth Muscle stomach
16 chr1:10295400-10311400 Weak transcription Osteobl bone
17 chr1:10295600-10312000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:10295600-10316400 Weak transcription Placenta Placenta
19 chr1:10295600-10317600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:10295800-10322000 Weak transcription Lung lung
21 chr1:10296200-10312400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:10296200-10313600 Weak transcription Fetal Brain Female brain
23 chr1:10296400-10309800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:10296400-10310600 Weak transcription Fetal Muscle Leg muscle
25 chr1:10296400-10312400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:10296400-10313200 Weak transcription Fetal Stomach stomach
27 chr1:10296400-10316800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:10297200-10316200 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr1:10297200-10316200 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr1:10297400-10310400 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr1:10297400-10312400 Weak transcription NHLF lung
32 chr1:10297400-10316200 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:10297600-10311200 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:10297600-10311800 Weak transcription HSMM muscle
35 chr1:10297600-10311800 Weak transcription NHDF-Ad bronchial
36 chr1:10297600-10312400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:10297800-10312400 Weak transcription Rectal Smooth Muscle rectum
38 chr1:10298000-10311400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:10298000-10312400 Weak transcription HepG2 liver
40 chr1:10298400-10312400 Weak transcription Right Atrium heart
41 chr1:10299200-10311800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:10302000-10313200 Weak transcription Fetal Heart heart
43 chr1:10302000-10321800 Weak transcription Esophagus oesophagus
44 chr1:10302200-10313800 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr1:10302400-10312600 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr1:10302400-10315600 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr1:10302600-10313200 Weak transcription Fetal Kidney kidney
48 chr1:10303200-10313400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:10303200-10316000 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr1:10303800-10310800 Weak transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015