Variant report

Variant	rs1391117
Chromosome Location	chr8:104129007-104129008
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:104123990..104126245-chr8:104127280..104130143,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs2454012	0.82[CEU][hapmap]
rs2454035	0.90[ASN][1000 genomes]
rs2515177	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831413	chr8:104085141-104269789	Weak transcription Flanking Active TSS Active TSS Enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	28 gene(s)	inside rSNPs	diseases
2	nsv429931	chr8:104097396-104878014	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
3	esv1848810	chr8:104128496-104369288	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
4	esv1844303	chr8:104128696-104369090	Genic enhancers Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:104119400-104134000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:104122000-104134600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr8:104122400-104131200	Weak transcription	NH-A	brain
4	chr8:104123600-104132600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr8:104126600-104132000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr8:104127200-104132000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr8:104127400-104133200	Weak transcription	HSMMtube	muscle
8	chr8:104128200-104131200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr8:104128400-104132800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr8:104128600-104132600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
11	chr8:104128600-104133000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr8:104128800-104132000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr8:104128800-104132400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr8:104128800-104132400	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr8:104128800-104132400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
16	chr8:104128800-104132600	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr8:104128800-104132600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr8:104128800-104133200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr8:104128800-104134200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr8:104129000-104130800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr8:104129000-104131800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr8:104129000-104133400	Weak transcription	Osteobl	bone

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