Variant report

Variant rs139179385
Chromosome Location chr17:17107379-17107380
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:17090200-17107400 Weak transcription Small Intestine intestine
2 chr17:17091800-17107600 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr17:17093600-17107400 Weak transcription Dnd41 blood
4 chr17:17093600-17108400 Weak transcription Thymus Thymus
5 chr17:17093800-17107400 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr17:17093800-17107600 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr17:17095200-17108400 Weak transcription Placenta Amnion Placenta Amnion
8 chr17:17095400-17108200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr17:17095600-17107400 Weak transcription HMEC breast
10 chr17:17095600-17107600 Weak transcription Osteobl bone
11 chr17:17096000-17107400 Weak transcription Fetal Heart heart
12 chr17:17096800-17107400 Weak transcription Primary B cells from cord blood blood
13 chr17:17100800-17107600 Weak transcription NHDF-Ad bronchial
14 chr17:17101200-17107800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr17:17102400-17107400 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr17:17103600-17108200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr17:17104000-17107600 Strong transcription Fetal Intestine Small intestine
18 chr17:17104200-17107400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr17:17104200-17108800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr17:17104200-17110400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr17:17104400-17114000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr17:17104600-17108800 Enhancers Left Ventricle heart
23 chr17:17104800-17114000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr17:17105000-17107600 Weak transcription Fetal Kidney kidney
25 chr17:17105000-17116200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr17:17105600-17107400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr17:17105600-17107400 Weak transcription Duodenum Mucosa Duodenum
28 chr17:17105600-17107600 Weak transcription Fetal Lung lung
29 chr17:17105600-17107600 Strong transcription NHLF lung
30 chr17:17105800-17107400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr17:17105800-17107600 Weak transcription HSMM muscle
32 chr17:17106000-17107400 Weak transcription Esophagus oesophagus
33 chr17:17106000-17107400 Weak transcription HSMMtube muscle
34 chr17:17106000-17108600 Enhancers Right Ventricle heart
35 chr17:17106200-17108400 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr17:17106200-17109200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr17:17106400-17107400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr17:17106400-17107400 Weak transcription Primary B cells from peripheral blood blood
39 chr17:17106400-17107400 Weak transcription Fetal Intestine Large intestine
40 chr17:17106400-17107600 Enhancers Brain Substantia Nigra brain
41 chr17:17106400-17107800 Weak transcription Primary T cells from cord blood blood
42 chr17:17106400-17108000 Enhancers Ovary ovary
43 chr17:17106400-17108200 Enhancers Liver Liver
44 chr17:17106400-17108200 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
45 chr17:17106400-17108800 Enhancers Right Atrium heart
46 chr17:17106400-17110400 Enhancers Fetal Brain Male brain
47 chr17:17106600-17107400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr17:17106600-17107400 Weak transcription Brain Germinal Matrix brain
49 chr17:17106600-17107400 Weak transcription A549 lung
50 chr17:17106600-17107600 Enhancers Brain Inferior Temporal Lobe brain

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