Variant report

Variant	rs139225006
Chromosome Location	chr8:127846627-127846628
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:127844604..127847451-chr8:127850237..127852011,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1819408	chr8:127835876-127898165	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv6382	chr8:127845446-127890549	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:127842400-127847000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr8:127844400-127847800	Enhancers	Fetal Muscle Leg	muscle
3	chr8:127844400-127848000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:127844800-127847200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr8:127845000-127846800	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr8:127845000-127846800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr8:127845000-127846800	Enhancers	Psoas Muscle	Psoas
8	chr8:127845000-127847000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr8:127845000-127847200	Enhancers	Fetal Muscle Trunk	muscle
10	chr8:127845200-127846800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr8:127845200-127846800	Enhancers	Fetal Heart	heart
12	chr8:127845400-127846800	Enhancers	Colon Smooth Muscle	Colon
13	chr8:127845400-127846800	Enhancers	Fetal Lung	lung
14	chr8:127845400-127846800	Enhancers	Fetal Stomach	stomach
15	chr8:127845400-127847000	Enhancers	Placenta	Placenta
16	chr8:127845600-127846800	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr8:127845600-127846800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr8:127845600-127846800	Enhancers	Adipose Nuclei	Adipose
19	chr8:127845600-127846800	Enhancers	Fetal Thymus	thymus
20	chr8:127845600-127846800	Enhancers	Gastric	stomach
21	chr8:127845600-127846800	Enhancers	Left Ventricle	heart
22	chr8:127845600-127846800	Enhancers	HMEC	breast
23	chr8:127845600-127846800	Flanking Active TSS	Osteobl	bone
24	chr8:127845600-127847000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr8:127845800-127846800	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr8:127845800-127846800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr8:127845800-127846800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr8:127845800-127846800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr8:127845800-127846800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr8:127845800-127846800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
31	chr8:127845800-127846800	Enhancers	Fetal Kidney	kidney
32	chr8:127845800-127846800	Enhancers	Placenta Amnion	Placenta Amnion
33	chr8:127845800-127846800	Flanking Active TSS	HSMMtube	muscle
34	chr8:127845800-127846800	Enhancers	NHEK	skin
35	chr8:127845800-127847000	Flanking Active TSS	HSMM	muscle
36	chr8:127845800-127847600	Enhancers	Skeletal Muscle Female	skeletal muscle
37	chr8:127846200-127846800	Enhancers	NH-A	brain
38	chr8:127846200-127847600	Enhancers	NHDF-Ad	bronchial
39	chr8:127846200-127847800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr8:127846200-127851600	Weak transcription	Sigmoid Colon	Sigmoid Colon
41	chr8:127846400-127846800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr8:127846400-127847000	Enhancers	HUVEC	blood vessel
43	chr8:127846600-127846800	Enhancers	Skeletal Muscle Male	skeletal muscle
44	chr8:127846600-127847000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr8:127846600-127848000	Enhancers	NHLF	lung
46	chr8:127846600-127849800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr8:127846600-127849800	Weak transcription	HUES6 Cell Line	embryonic stem cell
48	chr8:127846600-127851600	Weak transcription	Stomach Mucosa	stomach
49	chr8:127846600-127858200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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