Variant report

Variant	rs139349168
Chromosome Location	chr1:192573864-192573865
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532618	chr1:192537006-193149179	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
2	nsv467005	chr1:192549912-192625360	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv548659	chr1:192549912-192625360	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv3325736	chr1:192573816-192574216	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:192570600-192574600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr1:192571000-192574200	Weak transcription	Aorta	Aorta
3	chr1:192571000-192574200	Weak transcription	Fetal Heart	heart
4	chr1:192572400-192576200	Enhancers	GM12878-XiMat	blood
5	chr1:192572400-192577600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr1:192572600-192578800	Weak transcription	Colon Smooth Muscle	Colon
7	chr1:192572800-192576400	Weak transcription	Dnd41	blood
8	chr1:192573600-192575600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr1:192573800-192574200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr1:192573800-192574800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr1:192573800-192575000	Enhancers	HSMM	muscle
12	chr1:192573800-192575600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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