Variant report

Variant	rs1394310
Chromosome Location	chr13:61492812-61492813
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs17059106	0.88[AMR][1000 genomes]
rs1887893	0.89[ASN][1000 genomes]
rs4886288	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4886290	0.87[CEU][hapmap];0.88[AMR][1000 genomes]
rs73221655	0.89[ASN][1000 genomes]
rs9598193	0.88[AMR][1000 genomes]
rs965820	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832624	chr13:61383648-61553974	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:61492800-61493200	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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