The 2.0 version of rSNPBase

Variant report

Variant rs139476368
Chromosome Location chr22:29503268-29503269
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:29475600-29505600 Weak transcription Spleen Spleen
2 chr22:29483400-29550200 Weak transcription Rectal Smooth Muscle rectum
3 chr22:29486600-29519000 Weak transcription Fetal Brain Male brain
4 chr22:29488400-29521200 Weak transcription Lung lung
5 chr22:29490000-29505200 Weak transcription Aorta Aorta
6 chr22:29490000-29514000 Weak transcription Stomach Smooth Muscle stomach
7 chr22:29490200-29503600 Weak transcription HMEC breast
8 chr22:29490400-29508000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr22:29490400-29539800 Weak transcription Psoas Muscle Psoas
10 chr22:29491200-29521200 Weak transcription Colonic Mucosa Colon
11 chr22:29491600-29522200 Weak transcription Liver Liver
12 chr22:29491800-29503600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr22:29491800-29504400 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr22:29491800-29505400 Weak transcription Duodenum Mucosa Duodenum
15 chr22:29492000-29503800 Weak transcription NHDF-Ad bronchial
16 chr22:29493200-29503600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr22:29493200-29504200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr22:29493200-29504400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr22:29493200-29505400 Weak transcription Right Ventricle heart
20 chr22:29493200-29511600 Weak transcription Gastric stomach
21 chr22:29493200-29521000 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr22:29493200-29521200 Weak transcription Pancreas Pancrea
23 chr22:29493200-29536400 Weak transcription ES-WA7 Cell Line embryonic stem cell
24 chr22:29493400-29505400 Weak transcription Small Intestine intestine
25 chr22:29493400-29516400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr22:29493800-29511600 Weak transcription Fetal Heart heart
27 chr22:29494200-29505400 Weak transcription HepG2 liver
28 chr22:29494600-29506000 Weak transcription Left Ventricle heart
29 chr22:29495000-29504800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr22:29495000-29505600 Weak transcription Right Atrium heart
31 chr22:29495000-29509200 Weak transcription Fetal Brain Female brain
32 chr22:29495200-29503800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr22:29495200-29505400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr22:29495200-29505400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr22:29495200-29505800 Weak transcription Adipose Nuclei Adipose
36 chr22:29495200-29516600 Weak transcription Esophagus oesophagus
37 chr22:29495400-29503600 Weak transcription NHEK skin
38 chr22:29495400-29505400 Weak transcription Fetal Intestine Large intestine
39 chr22:29495600-29504200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr22:29496000-29504000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr22:29496600-29505600 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr22:29498000-29503600 Weak transcription Placenta Placenta
43 chr22:29498000-29505400 Weak transcription Fetal Kidney kidney
44 chr22:29498400-29505800 Weak transcription Fetal Thymus thymus
45 chr22:29498800-29509200 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr22:29499000-29504200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr22:29499400-29504000 Weak transcription Placenta Amnion Placenta Amnion
48 chr22:29499400-29506000 Weak transcription Thymus Thymus
49 chr22:29499400-29508000 Weak transcription Brain Angular Gyrus brain
50 chr22:29499400-29508000 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015