Variant report

Variant rs1394769
Chromosome Location chr3:24328991-24328992
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:24297200-24335000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:24311000-24335200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr3:24312200-24333800 Weak transcription Fetal Intestine Large intestine
4 chr3:24317400-24344600 Weak transcription HepG2 liver
5 chr3:24318800-24335200 Weak transcription Aorta Aorta
6 chr3:24320600-24330200 Weak transcription NHDF-Ad bronchial
7 chr3:24323400-24338200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr3:24324600-24329400 Weak transcription Stomach Mucosa stomach
9 chr3:24326800-24331000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr3:24327000-24334600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr3:24327600-24329000 Weak transcription Fetal Lung lung
12 chr3:24327600-24333000 Enhancers Colon Smooth Muscle Colon
13 chr3:24327800-24329000 Weak transcription Psoas Muscle Psoas
14 chr3:24327800-24329200 Weak transcription Liver Liver
15 chr3:24327800-24329400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr3:24328000-24329600 Enhancers Rectal Smooth Muscle rectum
17 chr3:24328000-24329800 Enhancers Skeletal Muscle Male skeletal muscle
18 chr3:24328400-24329400 Enhancers Stomach Smooth Muscle stomach
19 chr3:24328400-24330400 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr3:24328400-24332800 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr3:24328600-24329800 Enhancers Skeletal Muscle Female skeletal muscle
22 chr3:24328600-24330800 Enhancers Fetal Stomach stomach
23 chr3:24328600-24332000 Enhancers Cortex derived primary cultured neurospheres brain
24 chr3:24328600-24333800 Weak transcription Fetal Intestine Small intestine
25 chr3:24328800-24329400 Enhancers Placenta Amnion Placenta Amnion
26 chr3:24328800-24331200 Enhancers Brain Substantia Nigra brain

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