The 2.0 version of rSNPBase

Variant report

Variant rs139657717
Chromosome Location chr4:54452509-54452510
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:54425200-54457400 Weak transcription Right Atrium heart
2 chr4:54431200-54456600 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr4:54438600-54452800 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr4:54439000-54454800 Weak transcription Left Ventricle heart
5 chr4:54439200-54454600 Weak transcription Aorta Aorta
6 chr4:54443600-54457000 Weak transcription Colonic Mucosa Colon
7 chr4:54443800-54452600 Weak transcription Fetal Intestine Large intestine
8 chr4:54443800-54453600 Weak transcription Duodenum Mucosa Duodenum
9 chr4:54444000-54454600 Weak transcription Placenta Placenta
10 chr4:54447400-54454800 Weak transcription Gastric stomach
11 chr4:54448600-54454600 Weak transcription Esophagus oesophagus
12 chr4:54448600-54457400 Weak transcription HMEC breast
13 chr4:54448800-54453200 Weak transcription Liver Liver
14 chr4:54448800-54453600 Weak transcription Fetal Kidney kidney
15 chr4:54449200-54453800 Weak transcription Pancreas Pancrea
16 chr4:54449800-54453800 Enhancers NHDF-Ad bronchial
17 chr4:54450000-54454600 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr4:54450800-54457000 Weak transcription Placenta Amnion Placenta Amnion
19 chr4:54451000-54452600 Weak transcription HepG2 liver
20 chr4:54451000-54453400 Enhancers NHLF lung
21 chr4:54451200-54452600 Weak transcription Small Intestine intestine
22 chr4:54451400-54453600 Enhancers Fetal Heart heart
23 chr4:54451600-54452600 Enhancers Fetal Lung lung
24 chr4:54451600-54452800 Enhancers Muscle Satellite Cultured Cells --
25 chr4:54451600-54452800 Enhancers NHEK skin
26 chr4:54451600-54453000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr4:54451600-54453000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr4:54451800-54452800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr4:54451800-54452800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr4:54451800-54452800 Enhancers Sigmoid Colon Sigmoid Colon
31 chr4:54451800-54453000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr4:54451800-54453000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr4:54451800-54453000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr4:54451800-54453000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr4:54451800-54453200 Enhancers Rectal Mucosa Donor 31 rectum
36 chr4:54451800-54453200 Enhancers Osteobl bone
37 chr4:54452000-54452800 Enhancers HSMMtube muscle
38 chr4:54452000-54453000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr4:54452000-54453000 Enhancers NH-A brain
40 chr4:54452200-54452800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
41 chr4:54452400-54452600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr4:54452400-54452600 Enhancers Fetal Brain Male brain
43 chr4:54452400-54452600 Enhancers Fetal Muscle Leg muscle
44 chr4:54452400-54452800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr4:54452400-54455600 Enhancers Fetal Intestine Small intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015