The 2.0 version of rSNPBase

Variant report

Variant rs139699350
Chromosome Location chr4:78639135-78639136
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:78621400-78645800 Weak transcription Stomach Smooth Muscle stomach
2 chr4:78621600-78643800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr4:78626400-78644400 Weak transcription Placenta Placenta
4 chr4:78626400-78645200 Weak transcription Fetal Muscle Trunk muscle
5 chr4:78628400-78648400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr4:78628600-78641400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr4:78629000-78649400 Weak transcription HMEC breast
8 chr4:78629200-78676600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr4:78629400-78649400 Weak transcription Spleen Spleen
10 chr4:78629400-78656200 Weak transcription Small Intestine intestine
11 chr4:78630000-78643600 Weak transcription Duodenum Mucosa Duodenum
12 chr4:78630200-78660000 Weak transcription Muscle Satellite Cultured Cells --
13 chr4:78631200-78656000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
14 chr4:78631400-78643400 Weak transcription Gastric stomach
15 chr4:78631600-78649400 Weak transcription Brain Hippocampus Middle brain
16 chr4:78631600-78652600 Weak transcription Esophagus oesophagus
17 chr4:78631800-78640800 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr4:78631800-78649400 Weak transcription Aorta Aorta
19 chr4:78632000-78651800 Weak transcription HepG2 liver
20 chr4:78632400-78640600 Weak transcription Adipose Nuclei Adipose
21 chr4:78632400-78642800 Weak transcription Fetal Intestine Small intestine
22 chr4:78632600-78697800 Weak transcription Colonic Mucosa Colon
23 chr4:78633200-78639400 Strong transcription Fetal Thymus thymus
24 chr4:78633400-78641400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr4:78633600-78641400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr4:78633600-78642800 Weak transcription Fetal Stomach stomach
27 chr4:78633600-78645200 Weak transcription Pancreas Pancrea
28 chr4:78633800-78639200 Strong transcription Dnd41 blood
29 chr4:78634000-78647600 Weak transcription HSMM muscle
30 chr4:78634200-78643400 Weak transcription Lung lung
31 chr4:78634400-78640600 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr4:78634400-78643400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr4:78634600-78642400 Weak transcription HSMMtube muscle
34 chr4:78634800-78643000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr4:78634800-78643000 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr4:78635000-78646000 Weak transcription Fetal Lung lung
37 chr4:78635600-78639400 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr4:78635600-78652800 Strong transcription Primary B cells from peripheral blood blood
39 chr4:78635800-78639200 Strong transcription Primary hematopoietic stem cells blood
40 chr4:78636000-78639200 Strong transcription Primary B cells from cord blood blood
41 chr4:78636000-78639400 Strong transcription Primary monocytes fromperipheralblood blood
42 chr4:78636000-78651600 Weak transcription Fetal Heart heart
43 chr4:78636200-78646000 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr4:78636200-78647400 Weak transcription Fetal Kidney kidney
45 chr4:78636200-78649600 Weak transcription Colon Smooth Muscle Colon
46 chr4:78636400-78659000 Weak transcription Psoas Muscle Psoas
47 chr4:78636600-78639400 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr4:78636600-78645000 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr4:78636800-78649400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr4:78636800-78655400 Strong transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015