Variant report

Variant	rs139840650
Chromosome Location	chr13:76298559-76298560
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949152	chr13:76211453-76366622	Enhancers Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv900579	chr13:76244056-76307981	Enhancers Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1091	chr13:76282392-76327906	ZNF genes & repeats Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv976261	chr13:76297598-76301199	Weak transcription Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:76279400-76308000	Weak transcription	Left Ventricle	heart
2	chr13:76283600-76308000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr13:76290800-76299000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr13:76294000-76300200	Weak transcription	HSMMtube	muscle
5	chr13:76294400-76299000	Weak transcription	NHLF	lung
6	chr13:76294800-76321800	Weak transcription	NH-A	brain
7	chr13:76297000-76300800	Enhancers	Hela-S3	cervix
8	chr13:76297600-76298800	Genic enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr13:76297600-76299800	Enhancers	NHDF-Ad	bronchial
10	chr13:76297600-76300000	Enhancers	Osteobl	bone
11	chr13:76297800-76298600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr13:76297800-76298600	Enhancers	Small Intestine	intestine
13	chr13:76297800-76300200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr13:76297800-76300200	Enhancers	Rectal Mucosa Donor 31	rectum
15	chr13:76297800-76300400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr13:76297800-76301400	Genic enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr13:76297800-76301400	Enhancers	Muscle Satellite Cultured Cells	--
18	chr13:76298000-76298600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr13:76298000-76299200	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr13:76298000-76299400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr13:76298000-76299600	Enhancers	Placenta Amnion	Placenta Amnion
22	chr13:76298000-76301400	Enhancers	Stomach Mucosa	stomach
23	chr13:76298200-76298600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr13:76298200-76298600	Enhancers	Gastric	stomach
25	chr13:76298200-76298600	Enhancers	Psoas Muscle	Psoas
26	chr13:76298200-76298600	Enhancers	HSMM	muscle
27	chr13:76298200-76299000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr13:76298200-76299200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr13:76298200-76299200	Weak transcription	Fetal Heart	heart
30	chr13:76298200-76300600	Enhancers	A549	lung
31	chr13:76298200-76301000	Enhancers	HUVEC	blood vessel
32	chr13:76298400-76299800	Enhancers	Fetal Intestine Small	intestine
33	chr13:76298400-76300000	Enhancers	Duodenum Mucosa	Duodenum
34	chr13:76298400-76301200	Enhancers	Fetal Lung	lung

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