Variant report

Variant	rs139864286
Chromosome Location	chr2:32331178-32331179
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949102	chr2:32030307-33011548	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
2	nsv833670	chr2:32295778-32481857	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
3	nsv873778	chr2:32297984-32409007	Strong transcription Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv873779	chr2:32330885-32372245	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:32290400-32353400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr2:32291000-32332600	Weak transcription	A549	lung
3	chr2:32291600-32332200	Weak transcription	HUVEC	blood vessel
4	chr2:32292000-32343200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr2:32292600-32353800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr2:32295800-32353800	Weak transcription	Fetal Brain Male	brain
7	chr2:32296400-32362600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr2:32297600-32360600	Weak transcription	Osteobl	bone
9	chr2:32298800-32341400	Weak transcription	Small Intestine	intestine
10	chr2:32300000-32339600	Weak transcription	HepG2	liver
11	chr2:32309800-32381200	Weak transcription	NHDF-Ad	bronchial
12	chr2:32313200-32360600	Weak transcription	NH-A	brain
13	chr2:32316000-32353600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr2:32316200-32331200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr2:32316200-32343200	Weak transcription	HSMM	muscle
16	chr2:32322200-32353400	Weak transcription	K562	blood
17	chr2:32325400-32353800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
18	chr2:32326000-32352200	Weak transcription	HSMMtube	muscle
19	chr2:32329600-32333000	Strong transcription	Primary T cells from cord blood	blood
20	chr2:32330200-32331600	ZNF genes & repeats	Ovary	ovary
21	chr2:32330200-32332000	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
22	chr2:32330200-32332200	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
23	chr2:32330200-32332400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
24	chr2:32330200-32332600	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
25	chr2:32330200-32333000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chr2:32330200-32333000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr2:32330200-32333000	Strong transcription	Primary T helper cells PMA-I stimulated	--
28	chr2:32330200-32333200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
29	chr2:32330200-32333200	Strong transcription	Liver	Liver
30	chr2:32330200-32333400	Strong transcription	Stomach Smooth Muscle	stomach
31	chr2:32330200-32333600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
32	chr2:32330200-32333600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr2:32330200-32334000	Strong transcription	Fetal Thymus	thymus
34	chr2:32330400-32331200	Strong transcription	Duodenum Mucosa	Duodenum
35	chr2:32330400-32331600	Strong transcription	Brain Anterior Caudate	brain
36	chr2:32330400-32332200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
37	chr2:32330400-32332200	Strong transcription	Rectal Mucosa Donor 31	rectum
38	chr2:32330400-32332400	Strong transcription	Primary T cells fromperipheralblood	blood
39	chr2:32330400-32332400	Strong transcription	Left Ventricle	heart
40	chr2:32330400-32332600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
41	chr2:32330400-32332800	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
42	chr2:32330400-32333000	Strong transcription	Adipose Nuclei	Adipose
43	chr2:32330400-32333200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr2:32330400-32333400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
45	chr2:32330400-32333600	Strong transcription	Primary neutrophils fromperipheralblood	blood
46	chr2:32330400-32333600	Strong transcription	Primary B cells from cord blood	blood
47	chr2:32330400-32333800	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr2:32330400-32334000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr2:32330600-32331600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr2:32330600-32331800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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