Variant report
| Variant | rs139897060 |
|---|---|
| Chromosome Location | chr12:51610536-51610537 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:51567400-51610600 | Weak transcription | Right Atrium | heart |
| 2 | chr12:51581800-51610600 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr12:51584400-51610800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 4 | chr12:51585000-51610800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 5 | chr12:51592400-51610600 | Weak transcription | Pancreas | Pancrea |
| 6 | chr12:51592400-51610800 | Weak transcription | Esophagus | oesophagus |
| 7 | chr12:51595200-51610800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 8 | chr12:51597400-51611000 | Weak transcription | Primary T cells from cord blood | blood |
| 9 | chr12:51598200-51610600 | Weak transcription | Fetal Intestine Small | intestine |
| 10 | chr12:51598200-51610600 | Weak transcription | Gastric | stomach |
| 11 | chr12:51599400-51610600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 12 | chr12:51601600-51610600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 13 | chr12:51602400-51610600 | Weak transcription | Left Ventricle | heart |
| 14 | chr12:51604400-51610600 | Weak transcription | Small Intestine | intestine |
| 15 | chr12:51604800-51610600 | Weak transcription | Aorta | Aorta |
| 16 | chr12:51604800-51610600 | Weak transcription | Lung | lung |
| 17 | chr12:51605000-51611000 | Weak transcription | Spleen | Spleen |
| 18 | chr12:51605400-51610600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 19 | chr12:51605600-51610600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 20 | chr12:51605600-51610600 | Weak transcription | Fetal Intestine Large | intestine |
| 21 | chr12:51605800-51610600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 22 | chr12:51607000-51610600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 23 | chr12:51608800-51610600 | Weak transcription | Fetal Stomach | stomach |
| 24 | chr12:51610000-51610800 | Flanking Active TSS | Fetal Brain Female | brain |
| 25 | chr12:51610200-51610600 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 26 | chr12:51610200-51610600 | Flanking Active TSS | HUES6 Cell Line | embryonic stem cell |
| 27 | chr12:51610200-51610600 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 28 | chr12:51610200-51610600 | Flanking Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 29 | chr12:51610200-51610600 | Flanking Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 30 | chr12:51610200-51610600 | Flanking Active TSS | Brain Angular Gyrus | brain |
| 31 | chr12:51610200-51610600 | Flanking Active TSS | Brain Anterior Caudate | brain |
| 32 | chr12:51610200-51610600 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 33 | chr12:51610200-51610600 | Flanking Active TSS | Brain Inferior Temporal Lobe | brain |
| 34 | chr12:51610200-51610600 | Enhancers | Brain Substantia Nigra | brain |
| 35 | chr12:51610200-51610600 | Enhancers | Fetal Brain Male | brain |
| 36 | chr12:51610200-51610600 | Flanking Active TSS | NHDF-Ad | bronchial |
| 37 | chr12:51610200-51610800 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 38 | chr12:51610200-51610800 | Enhancers | Primary B cells from peripheral blood | blood |
| 39 | chr12:51610200-51610800 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 40 | chr12:51610200-51610800 | Enhancers | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 41 | chr12:51610200-51610800 | Flanking Active TSS | Adipose Nuclei | Adipose |
| 42 | chr12:51610200-51610800 | Flanking Active TSS | Brain Cingulate Gyrus | brain |
| 43 | chr12:51610200-51610800 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 44 | chr12:51610200-51610800 | Flanking Active TSS | Stomach Smooth Muscle | stomach |
| 45 | chr12:51610200-51610800 | Flanking Active TSS | Osteobl | bone |
| 46 | chr12:51610200-51611000 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 47 | chr12:51610200-51611000 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 48 | chr12:51610200-51612200 | Active TSS | H1 Cell Line | embryonic stem cell |
| 49 | chr12:51610200-51612200 | Active TSS | HUES48 Cell Line | embryonic stem cell |
| 50 | chr12:51610200-51612200 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
