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Variant report
Variant
rs139915984
Chromosome Location
chr5:94768596-94768597
allele
A/C/G
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:9)
CpG islands (count:0)
Chromatin interactive region (count:2)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
(count:9 , 50 per page) page:
1
No.
Transcrition factor
Chromosome Location
Cell Line
Cell type
Cell Stage
Matched TF binding sites
1
MAFF
chr5:94768505-94768859
K562
blood:
n/a
chr5:94768671-94768689
2
MAFK
chr5:94768524-94768862
H1-hESC
embryonic stem cell:
n/a
chr5:94768673-94768688
3
MAFK
chr5:94768497-94768828
Hela-S3
cervix:
n/a
chr5:94768673-94768688
4
MAFK
chr5:94768497-94768871
IMR90
lung:
n/a
chr5:94768673-94768688
5
MAFF
chr5:94768497-94768867
HepG2
liver:
n/a
chr5:94768671-94768689
6
MAFK
chr5:94768500-94768860
K562
blood:
n/a
chr5:94768673-94768688
7
MAFK
chr5:94768497-94768874
HepG2
liver:
n/a
chr5:94768673-94768688
8
MAFK
chr5:94768498-94768862
HepG2
liver:
n/a
chr5:94768673-94768688
9
MAFK
chr5:94768386-94768991
GM12878
blood:
n/a
chr5:94768673-94768688
No data
(count:2 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr5:94768113..94770869-chr5:94781811..94784172,2
K562
blood:
2
chr5:94762392..94764718-chr5:94767557..94769883,2
K562
blood:
No data
No data
No data
Variant related genes
Relation type
FAM81B
TF binding region
ENSG00000153347
Chromatin interaction
Extended variants information (count: 1 )
Associated traits (count: 0)
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
No.
Variant name
Chromosome position
Chromatin state
Related regulatory elements
Target genes
Extended variants
Associated traits
1
nsv882388
chr5:94764006-94925849
Weak transcription Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'
TF binding regionCpG islandChromatin interactive regionlncRNA
9 gene(s)
inside rSNPs
diseases
No data
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links