Variant report

Variant	rs140163729
Chromosome Location	chr18:10137512-10137513
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr18:10124765..10127704-chr18:10136968..10139456,2	K562	blood:
2	chr18:10130119..10133114-chr18:10136118..10137885,2	K562	blood:

Variant related genes	Relation type
ENSG00000265554	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv14276	chr18:10134666-10145472	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3410028	chr18:10134811-10145112	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv2761990	chr18:10136596-10143650	Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	esv3584724	chr18:10136596-10143650	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:10132400-10138600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr18:10132400-10139800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr18:10132600-10139800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr18:10132600-10139800	Weak transcription	HSMM	muscle
5	chr18:10133000-10139800	Weak transcription	Pancreas	Pancrea
6	chr18:10133400-10140400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr18:10134600-10139200	Weak transcription	Fetal Thymus	thymus
8	chr18:10134600-10139600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr18:10134600-10139600	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr18:10134600-10139800	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr18:10134600-10139800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr18:10134600-10140200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr18:10135200-10139400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr18:10135800-10139400	Weak transcription	NH-A	brain
15	chr18:10136000-10139600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr18:10136200-10137800	Weak transcription	NHDF-Ad	bronchial
17	chr18:10136200-10138200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr18:10136200-10139400	Weak transcription	Osteobl	bone
19	chr18:10136400-10139600	Weak transcription	NHEK	skin
20	chr18:10136800-10138400	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr18:10137400-10139800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr18:10137400-10140400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr18:10137400-10144400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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