| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1014095 |
chr1:152104486-152454591 |
Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
28 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1005472 |
chr1:152247763-152443448 |
Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
23 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv535161 |
chr1:152247763-152443448 |
Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
23 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv916016 |
chr1:152337775-152590520 |
Weak transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv872443 |
chr1:152400055-152459747 |
Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv872444 |
chr1:152400361-152440753 |
ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer
|
Chromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
