Variant report

Variant	rs140228003
Chromosome Location	chr8:67360793-67360794
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:67358368..67361034-chr8:67361272..67364476,3	K562	blood:
2	chr8:67358722..67361670-chr8:67363913..67366041,2	MCF-7	breast:
3	chr8:67360323..67362172-chr8:67364568..67366628,2	K562	blood:
4	chr8:67344388..67346218-chr8:67359592..67361320,2	K562	blood:

Variant related genes	Relation type
ENSG00000147576	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
3	esv3339106	chr8:67356798-67361196	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv6236	chr8:67359312-67403981	Flanking Active TSS Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67352000-67363600	Weak transcription	Esophagus	oesophagus
2	chr8:67352200-67361000	Weak transcription	Spleen	Spleen
3	chr8:67352200-67361200	Weak transcription	Gastric	stomach
4	chr8:67352200-67361200	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr8:67352200-67364600	Weak transcription	Psoas Muscle	Psoas
6	chr8:67352400-67360800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr8:67352400-67361600	Weak transcription	Duodenum Mucosa	Duodenum
8	chr8:67352400-67363600	Weak transcription	Rectal Smooth Muscle	rectum
9	chr8:67352400-67366600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr8:67352600-67363600	Weak transcription	Colon Smooth Muscle	Colon
11	chr8:67353200-67361000	Weak transcription	Primary hematopoietic stem cells	blood
12	chr8:67353200-67361200	Weak transcription	Monocytes-CD14+_RO01746	blood
13	chr8:67353400-67365400	Weak transcription	Fetal Brain Male	brain
14	chr8:67353400-67368000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr8:67353600-67365200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr8:67353600-67372400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr8:67354000-67367800	Weak transcription	Stomach Mucosa	stomach
18	chr8:67355000-67361200	Weak transcription	Fetal Intestine Small	intestine
19	chr8:67355000-67365200	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr8:67355400-67361000	Weak transcription	Fetal Stomach	stomach
21	chr8:67356200-67360800	Weak transcription	Fetal Muscle Trunk	muscle
22	chr8:67356200-67362200	Strong transcription	Skeletal Muscle Male	skeletal muscle
23	chr8:67356200-67374400	Strong transcription	Liver	Liver
24	chr8:67356400-67361800	Strong transcription	Skeletal Muscle Female	skeletal muscle
25	chr8:67356400-67366000	Weak transcription	Fetal Brain Female	brain
26	chr8:67356800-67365600	Strong transcription	Stomach Smooth Muscle	stomach
27	chr8:67357200-67360800	Weak transcription	Fetal Muscle Leg	muscle
28	chr8:67357400-67365000	Weak transcription	Primary T cells from cord blood	blood
29	chr8:67357800-67363400	Strong transcription	Left Ventricle	heart
30	chr8:67358400-67360800	Weak transcription	Primary T helper cells fromperipheralblood	blood
31	chr8:67358400-67364200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
32	chr8:67358600-67364600	Weak transcription	Right Atrium	heart
33	chr8:67358600-67365800	Strong transcription	Fetal Lung	lung
34	chr8:67358800-67360800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr8:67358800-67360800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
36	chr8:67358800-67360800	Weak transcription	Pancreas	Pancrea
37	chr8:67358800-67361200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr8:67358800-67361400	Weak transcription	Primary T cells fromperipheralblood	blood
39	chr8:67358800-67365400	Weak transcription	H1 Cell Line	embryonic stem cell
40	chr8:67359000-67360800	Weak transcription	Brain Cingulate Gyrus	brain
41	chr8:67359000-67360800	Weak transcription	Brain Substantia Nigra	brain
42	chr8:67359000-67360800	Weak transcription	Duodenum Smooth Muscle	Duodenum
43	chr8:67359000-67361400	Weak transcription	Osteobl	bone
44	chr8:67359000-67361600	Weak transcription	Brain Angular Gyrus	brain
45	chr8:67359000-67362000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
46	chr8:67359000-67365000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
47	chr8:67359000-67365200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
48	chr8:67359000-67365400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
49	chr8:67359000-67372200	Weak transcription	HSMMtube	muscle
50	chr8:67359200-67360800	Weak transcription	Brain Inferior Temporal Lobe	brain

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