Variant report

Variant rs1403245
Chromosome Location chr1:77336609-77336610
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:17 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77332800-77337400 Active TSS Brain Inferior Temporal Lobe brain
2 chr1:77335000-77336800 Active TSS Cortex derived primary cultured neurospheres brain
3 chr1:77335000-77337400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:77335000-77337400 Active TSS Brain Hippocampus Middle brain
5 chr1:77335000-77337800 Weak transcription Right Atrium heart
6 chr1:77335000-77360000 Weak transcription Ovary ovary
7 chr1:77335000-77371000 Weak transcription Aorta Aorta
8 chr1:77335200-77338400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:77335200-77341200 Weak transcription Fetal Stomach stomach
10 chr1:77335600-77337000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:77335800-77341000 Weak transcription Stomach Smooth Muscle stomach
12 chr1:77335800-77341600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:77336200-77337200 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr1:77336200-77337600 Weak transcription Fetal Brain Male brain
15 chr1:77336200-77339200 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr1:77336400-77336800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:77336600-77338200 Strong transcription HUES6 Cell Line embryonic stem cell

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