Variant report

Variant rs140400579
Chromosome Location chr3:28393375-28393376
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:28391000-28394400 Weak transcription Spleen Spleen
2 chr3:28391200-28393600 Weak transcription Gastric stomach
3 chr3:28391200-28395200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr3:28391400-28393600 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr3:28391400-28393600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr3:28391400-28393600 Weak transcription Aorta Aorta
7 chr3:28391400-28393600 Weak transcription Fetal Muscle Trunk muscle
8 chr3:28391400-28393600 Weak transcription Pancreas Pancrea
9 chr3:28391400-28393600 Weak transcription HSMM muscle
10 chr3:28391400-28394000 Weak transcription Brain Substantia Nigra brain
11 chr3:28391400-28394200 Weak transcription Left Ventricle heart
12 chr3:28391400-28394400 Weak transcription Placenta Placenta
13 chr3:28391400-28394400 Weak transcription Fetal Stomach stomach
14 chr3:28391400-28395200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr3:28391400-28395200 Weak transcription Brain Cingulate Gyrus brain
16 chr3:28391400-28396000 Weak transcription Colonic Mucosa Colon
17 chr3:28391600-28393400 Weak transcription Primary hematopoietic stem cells short term culture blood
18 chr3:28391600-28394600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr3:28391600-28395400 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr3:28391600-28395400 Weak transcription Brain Hippocampus Middle brain
21 chr3:28391600-28397800 Weak transcription Stomach Smooth Muscle stomach
22 chr3:28391600-28398600 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr3:28391800-28393400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr3:28391800-28394200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr3:28391800-28395000 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr3:28391800-28395200 Weak transcription Rectal Smooth Muscle rectum
27 chr3:28391800-28395200 Weak transcription Osteobl bone
28 chr3:28391800-28395400 Weak transcription Brain Angular Gyrus brain
29 chr3:28391800-28395600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr3:28391800-28397000 Weak transcription HSMMtube muscle
31 chr3:28392000-28393400 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr3:28392000-28393600 Weak transcription Colon Smooth Muscle Colon
33 chr3:28392000-28393600 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr3:28392000-28394200 Weak transcription NHLF lung
35 chr3:28392000-28395000 Weak transcription NHDF-Ad bronchial
36 chr3:28392000-28397200 Weak transcription Muscle Satellite Cultured Cells --
37 chr3:28392200-28394800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr3:28392200-28395400 Weak transcription Brain Anterior Caudate brain
39 chr3:28392200-28395800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:28392400-28393400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr3:28392400-28394800 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr3:28392400-28395000 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr3:28392400-28395400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr3:28392600-28393600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
45 chr3:28392600-28395400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr3:28392800-28395600 ZNF genes & repeats Fetal Lung lung
47 chr3:28392800-28395800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr3:28392800-28395800 ZNF genes & repeats Primary hematopoietic stem cells blood
49 chr3:28392800-28395800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
50 chr3:28393000-28395000 Weak transcription Psoas Muscle Psoas

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