The 2.0 version of rSNPBase

Variant report

Variant rs140465200
Chromosome Location chr18:45344098-45344099
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45327400-45358400 Weak transcription HSMMtube muscle
2 chr18:45327600-45352600 Weak transcription Fetal Brain Female brain
3 chr18:45328600-45351600 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr18:45332200-45352400 Weak transcription Adipose Nuclei Adipose
5 chr18:45332600-45351800 Weak transcription Fetal Muscle Leg muscle
6 chr18:45332800-45351600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr18:45333000-45357200 Weak transcription Primary hematopoietic stem cells blood
8 chr18:45333200-45345600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr18:45333800-45351600 Weak transcription A549 lung
10 chr18:45334600-45349800 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr18:45335400-45365600 Weak transcription Gastric stomach
12 chr18:45335800-45351600 Weak transcription Fetal Thymus thymus
13 chr18:45336400-45351600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr18:45336600-45351600 Weak transcription Thymus Thymus
15 chr18:45337600-45357200 Weak transcription Dnd41 blood
16 chr18:45339600-45359800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr18:45340200-45351800 Weak transcription Fetal Muscle Trunk muscle
18 chr18:45340400-45369400 Weak transcription Fetal Stomach stomach
19 chr18:45340800-45347800 Weak transcription Hela-S3 cervix
20 chr18:45341000-45364200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr18:45341400-45351800 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr18:45342000-45345400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr18:45342200-45344200 Enhancers HUES48 Cell Line embryonic stem cell
24 chr18:45342200-45344400 Enhancers iPS-20b Cell Line embryonic stem cell
25 chr18:45342200-45344800 Enhancers ES-I3 Cell Line embryonic stem cell
26 chr18:45342200-45345200 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr18:45342200-45384200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr18:45342400-45353800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr18:45342400-45365400 Weak transcription Psoas Muscle Psoas
30 chr18:45342600-45344200 Weak transcription Rectal Smooth Muscle rectum
31 chr18:45342600-45349200 Weak transcription Primary T cells from cord blood blood
32 chr18:45342600-45351600 Weak transcription Left Ventricle heart
33 chr18:45343200-45344800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr18:45343200-45351600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr18:45343400-45344200 Weak transcription H1 Cell Line embryonic stem cell
36 chr18:45343400-45351800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr18:45343600-45344200 Active TSS NHLF lung
38 chr18:45343600-45344400 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr18:45343600-45344400 Active TSS Aorta Aorta
40 chr18:45343600-45344600 Enhancers H9 Cell Line embryonic stem cell
41 chr18:45343600-45344600 Enhancers Fetal Lung lung
42 chr18:45343600-45345000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
43 chr18:45343600-45345000 Enhancers Cortex derived primary cultured neurospheres brain
44 chr18:45343600-45345000 Enhancers Brain Germinal Matrix brain
45 chr18:45343600-45345400 Enhancers HUES6 Cell Line embryonic stem cell
46 chr18:45343800-45344200 Active TSS Colon Smooth Muscle Colon
47 chr18:45343800-45344200 Active TSS Duodenum Smooth Muscle Duodenum
48 chr18:45343800-45344200 Active TSS Rectal Mucosa Donor 29 rectum
49 chr18:45343800-45344200 Enhancers Right Atrium heart
50 chr18:45343800-45344200 Active TSS NHDF-Ad bronchial

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Last update: Aug 31, 2015