The 2.0 version of rSNPBase

Variant report

Variant rs140540653
Chromosome Location chr1:168436189-168436190
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:168433800-168443400 Weak transcription Liver Liver
2 chr1:168434000-168437000 Enhancers Primary hematopoietic stem cells short term culture blood
3 chr1:168434400-168443600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr1:168434600-168436600 Enhancers Fetal Muscle Leg muscle
5 chr1:168434800-168439200 Enhancers Dnd41 blood
6 chr1:168434800-168440800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:168435000-168436400 Enhancers HepG2 liver
8 chr1:168435000-168436600 Enhancers Primary T helper cells PMA-I stimulated --
9 chr1:168435000-168436800 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr1:168435000-168436800 Enhancers Primary T killer memory cells from peripheral blood blood
11 chr1:168435000-168436800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:168435000-168437000 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr1:168435000-168437600 Enhancers Fetal Intestine Small intestine
14 chr1:168435000-168437800 Enhancers Fetal Kidney kidney
15 chr1:168435000-168438400 Enhancers Primary hematopoietic stem cells blood
16 chr1:168435000-168438400 Enhancers Placenta Amnion Placenta Amnion
17 chr1:168435000-168439600 Enhancers HSMMtube muscle
18 chr1:168435000-168440400 Enhancers Primary T helper cells fromperipheralblood blood
19 chr1:168435000-168440600 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr1:168435000-168440600 Enhancers Rectal Smooth Muscle rectum
21 chr1:168435200-168436200 Enhancers ES-WA7 Cell Line embryonic stem cell
22 chr1:168435200-168436200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:168435200-168436200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:168435200-168436200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:168435200-168436200 Enhancers Aorta Aorta
26 chr1:168435200-168436200 Enhancers Brain Germinal Matrix brain
27 chr1:168435200-168436200 Enhancers Fetal Lung lung
28 chr1:168435200-168436200 Enhancers Placenta Placenta
29 chr1:168435200-168436200 Enhancers Fetal Thymus thymus
30 chr1:168435200-168436200 Enhancers Spleen Spleen
31 chr1:168435200-168436200 Enhancers NH-A brain
32 chr1:168435200-168436400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:168435200-168436400 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr1:168435200-168436400 Enhancers Cortex derived primary cultured neurospheres brain
35 chr1:168435200-168436400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:168435200-168436400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:168435200-168436400 Enhancers Fetal Stomach stomach
38 chr1:168435200-168436400 Enhancers Psoas Muscle Psoas
39 chr1:168435200-168436400 Enhancers Rectal Mucosa Donor 31 rectum
40 chr1:168435200-168436400 Enhancers K562 blood
41 chr1:168435200-168436600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:168435200-168436600 Enhancers Duodenum Mucosa Duodenum
43 chr1:168435200-168436600 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr1:168435200-168436600 Enhancers Sigmoid Colon Sigmoid Colon
45 chr1:168435200-168436600 Enhancers A549 lung
46 chr1:168435200-168437000 Enhancers Primary T helper naive cells fromperipheralblood blood
47 chr1:168435200-168437400 Enhancers Fetal Intestine Large intestine
48 chr1:168435200-168437800 Enhancers Primary monocytes fromperipheralblood blood
49 chr1:168435200-168437800 Enhancers Colonic Mucosa Colon
50 chr1:168435200-168437800 Enhancers Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015