| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1066573 |
chr21:28096356-28374354 |
Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1057400 |
chr21:28104936-28359948 |
Strong transcription Genic enhancers Bivalent/Poised TSS Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv834068 |
chr21:28179670-28360808 |
Bivalent Enhancer Strong transcription Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
21 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1067475 |
chr21:28238746-29046707 |
Enhancers Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv275324 |
chr21:28280501-28284521 |
Enhancers Flanking Active TSS Weak transcription
|
lncRNA
|
n/a
|
inside rSNPs
|
n/a
|
| 6 |
nsv1063371 |
chr21:28282660-28294991 |
Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats
|
lncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv1065825 |
chr21:28282660-28296389 |
Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats
|
Chromatin interactive regionlncRNAmiRNA target site
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv1067026 |
chr21:28282660-28298049 |
Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats
|
Chromatin interactive regionlncRNAmiRNA target site
|
n/a
|
inside rSNPs
|
diseases
|
| 9 |
nsv1066904 |
chr21:28282834-28296389 |
Strong transcription Enhancers Flanking Active TSS Genic enhancers Weak transcription ZNF genes & repeats
|
Chromatin interactive regionlncRNAmiRNA target site
|
n/a
|
inside rSNPs
|
diseases
|
