The 2.0 version of rSNPBase

Variant report

Variant rs140668540
Chromosome Location chr2:7166691-7166692
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:7131000-7167600 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr2:7148200-7172600 Weak transcription H9 Cell Line embryonic stem cell
3 chr2:7148800-7171400 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr2:7151200-7185200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr2:7152600-7192400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr2:7154000-7183200 Strong transcription Primary T cells from cord blood blood
7 chr2:7154000-7190200 Strong transcription Dnd41 blood
8 chr2:7154600-7174800 Weak transcription Primary B cells from cord blood blood
9 chr2:7154600-7184200 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr2:7155000-7171400 Strong transcription Primary T helper cells fromperipheralblood blood
11 chr2:7155200-7182000 Strong transcription Primary T helper naive cells fromperipheralblood blood
12 chr2:7155600-7178800 Strong transcription Primary T helper cells PMA-I stimulated --
13 chr2:7156000-7168800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr2:7157000-7177600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
15 chr2:7157000-7179200 Weak transcription Aorta Aorta
16 chr2:7157200-7169000 Strong transcription Primary neutrophils fromperipheralblood blood
17 chr2:7157200-7185200 Strong transcription Primary hematopoietic stem cells short term culture blood
18 chr2:7158000-7168400 Strong transcription Primary T cells fromperipheralblood blood
19 chr2:7158200-7173200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr2:7158200-7188800 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr2:7158400-7173000 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr2:7158400-7186800 Weak transcription Placenta Amnion Placenta Amnion
23 chr2:7158600-7167000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr2:7158600-7173400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr2:7159000-7181000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr2:7159400-7186800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:7159600-7180600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr2:7160800-7169200 Weak transcription Placenta Placenta
29 chr2:7161800-7166800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr2:7162000-7168400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr2:7162000-7171600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr2:7162400-7169800 Weak transcription Esophagus oesophagus
33 chr2:7162800-7167400 Genic enhancers Left Ventricle heart
34 chr2:7162800-7171400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
35 chr2:7163000-7167200 Strong transcription Primary T killer naive cells fromperipheralblood blood
36 chr2:7163000-7171000 Strong transcription Primary T helper naive cells from peripheral blood blood
37 chr2:7163000-7171400 Weak transcription Stomach Mucosa stomach
38 chr2:7163200-7177400 Weak transcription Fetal Brain Male brain
39 chr2:7164000-7166800 Weak transcription Psoas Muscle Psoas
40 chr2:7164000-7167200 Strong transcription Brain Inferior Temporal Lobe brain
41 chr2:7164000-7171200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr2:7164000-7171600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr2:7164000-7177600 Weak transcription NHDF-Ad bronchial
44 chr2:7164000-7178000 Weak transcription K562 blood
45 chr2:7164200-7168800 Weak transcription Duodenum Mucosa Duodenum
46 chr2:7164400-7167000 Strong transcription Brain Cingulate Gyrus brain
47 chr2:7164400-7167200 Strong transcription HepG2 liver
48 chr2:7164600-7166800 Weak transcription Brain Angular Gyrus brain
49 chr2:7164600-7167800 Strong transcription iPS-20b Cell Line embryonic stem cell
50 chr2:7164600-7171200 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015