Variant report

Variant	rs140679142
Chromosome Location	chr14:32363868-32363869
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564180	chr14:31958566-32368934	Strong transcription Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
2	nsv564181	chr14:31958761-32363980	Weak transcription Flanking Active TSS ZNF genes & repeats Enhancers Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv564182	chr14:32110519-32584337	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
4	nsv1046526	chr14:32110537-32567426	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
5	nsv526200	chr14:32308511-32454372	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
6	esv15076	chr14:32363648-32364163	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32354400-32364600	Weak transcription	HSMM	muscle
2	chr14:32358800-32366600	Weak transcription	Fetal Brain Female	brain
3	chr14:32360600-32365000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr14:32360600-32365200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:32360800-32365200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr14:32361000-32365200	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr14:32361200-32364800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr14:32361400-32365200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr14:32362000-32364000	Enhancers	Adipose Nuclei	Adipose
10	chr14:32362000-32365200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr14:32362200-32365200	Enhancers	Stomach Mucosa	stomach
12	chr14:32362400-32364000	Enhancers	Fetal Muscle Leg	muscle
13	chr14:32362400-32364200	Enhancers	Lung	lung
14	chr14:32362400-32364200	Enhancers	NHEK	skin
15	chr14:32362400-32364800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr14:32362400-32365000	Enhancers	Brain Cingulate Gyrus	brain
17	chr14:32362400-32365200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr14:32362400-32365200	Enhancers	Brain Hippocampus Middle	brain
19	chr14:32362400-32365200	Enhancers	HMEC	breast
20	chr14:32362600-32364000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
21	chr14:32362600-32364000	Weak transcription	Brain Angular Gyrus	brain
22	chr14:32362600-32364200	Weak transcription	NHLF	lung
23	chr14:32362600-32364400	Enhancers	Primary B cells from peripheral blood	blood
24	chr14:32362600-32365000	Enhancers	Fetal Stomach	stomach
25	chr14:32362600-32365200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr14:32362600-32365600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr14:32362800-32364000	Weak transcription	Muscle Satellite Cultured Cells	--
28	chr14:32362800-32364000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr14:32362800-32364200	Weak transcription	Sigmoid Colon	Sigmoid Colon
30	chr14:32362800-32364200	Weak transcription	Osteobl	bone
31	chr14:32363000-32364000	Weak transcription	H1 Cell Line	embryonic stem cell
32	chr14:32363000-32364000	Weak transcription	Brain Inferior Temporal Lobe	brain
33	chr14:32363000-32364000	Weak transcription	Brain Substantia Nigra	brain
34	chr14:32363000-32364200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
35	chr14:32363000-32364200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
36	chr14:32363000-32364200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr14:32363000-32364400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
38	chr14:32363000-32364800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr14:32363000-32366800	Weak transcription	Fetal Lung	lung
40	chr14:32363200-32364000	Weak transcription	Placenta	Placenta
41	chr14:32363200-32364200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
42	chr14:32363200-32364200	Flanking Active TSS	K562	blood
43	chr14:32363200-32364600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
44	chr14:32363200-32365600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr14:32363200-32366200	Weak transcription	Left Ventricle	heart
46	chr14:32363400-32364000	Enhancers	Gastric	stomach
47	chr14:32363400-32364400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
48	chr14:32363400-32364600	Enhancers	Spleen	Spleen
49	chr14:32363400-32365200	Enhancers	Placenta Amnion	Placenta Amnion
50	chr14:32363600-32364000	Weak transcription	Brain Anterior Caudate	brain

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