Variant report

Variant	rs140750086
Chromosome Location	chr1:77731097-77731098
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432398	chr1:77707391-77740836	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1005183	chr1:77728990-77949309	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv535010	chr1:77728990-77949309	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
4	nsv932557	chr1:77730247-77958687	Flanking Active TSS Enhancers Strong transcription Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:77730600-77731200	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
2	chr1:77730600-77731200	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
3	chr1:77730600-77731400	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
4	chr1:77730800-77731200	Bivalent Enhancer	H9 Cell Line	embryonic stem cell
5	chr1:77730800-77731200	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr1:77730800-77731200	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
7	chr1:77730800-77731200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr1:77730800-77731200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr1:77730800-77731400	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
10	chr1:77730800-77731400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr1:77730800-77731400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr1:77730800-77731400	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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