Variant report

Variant rs140824562
Chromosome Location chr1:151344460-151344461
allele -/GGCATTCTGCCAGCTC
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151335000-151344600 Weak transcription Fetal Kidney kidney
2 chr1:151336200-151344600 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr1:151336200-151344600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:151336800-151344600 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr1:151337000-151344600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr1:151337200-151344800 Weak transcription H9 Cell Line embryonic stem cell
7 chr1:151338600-151344600 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:151340600-151344600 Enhancers Pancreas Pancrea
9 chr1:151341600-151344800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:151341800-151344800 Enhancers Primary monocytes fromperipheralblood blood
11 chr1:151341800-151345200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:151342000-151344800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:151342200-151344800 Enhancers Fetal Heart heart
14 chr1:151342200-151345400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
15 chr1:151342400-151345000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:151342400-151345800 Flanking Active TSS Stomach Smooth Muscle stomach
17 chr1:151342400-151346400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:151342400-151346600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
19 chr1:151343000-151345200 Flanking Active TSS Liver Liver
20 chr1:151343200-151346600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
21 chr1:151343400-151344600 Weak transcription Fetal Thymus thymus
22 chr1:151343400-151345200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:151343600-151345200 Active TSS Rectal Mucosa Donor 29 rectum
24 chr1:151343600-151345400 Active TSS Colonic Mucosa Colon
25 chr1:151343600-151346400 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:151343800-151344600 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr1:151343800-151344800 Flanking Active TSS Duodenum Mucosa Duodenum
28 chr1:151343800-151344800 Enhancers HSMM muscle
29 chr1:151343800-151345000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:151343800-151345200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:151343800-151345200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:151343800-151345400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:151343800-151345400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:151343800-151345400 Flanking Active TSS Hela-S3 cervix
35 chr1:151343800-151345400 Flanking Active TSS Osteobl bone
36 chr1:151344000-151344600 Flanking Active TSS HepG2 liver
37 chr1:151344000-151345200 Flanking Active TSS Brain Germinal Matrix brain
38 chr1:151344000-151345200 Flanking Active TSS Fetal Intestine Small intestine
39 chr1:151344000-151345200 Flanking Active TSS Fetal Stomach stomach
40 chr1:151344000-151345200 Active TSS Gastric stomach
41 chr1:151344000-151345200 Active TSS Sigmoid Colon Sigmoid Colon
42 chr1:151344000-151345400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:151344000-151345400 Flanking Active TSS Adipose Nuclei Adipose
44 chr1:151344000-151345400 Flanking Active TSS Ovary ovary
45 chr1:151344000-151345400 Flanking Active TSS A549 lung
46 chr1:151344000-151346200 Enhancers Fetal Brain Male brain
47 chr1:151344200-151344600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:151344200-151344600 Enhancers Cortex derived primary cultured neurospheres brain
49 chr1:151344200-151344600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
50 chr1:151344200-151344600 Enhancers HSMMtube muscle

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