The 2.0 version of rSNPBase

Variant report

Variant rs140901429
Chromosome Location chr20:16559719-16559720
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16556000-16560200 Weak transcription Small Intestine intestine
2 chr20:16556200-16559800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr20:16556200-16560000 Weak transcription Stomach Mucosa stomach
4 chr20:16556200-16560400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr20:16556400-16560000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr20:16556400-16560000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr20:16556400-16560000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr20:16556400-16560000 Weak transcription Fetal Kidney kidney
9 chr20:16556400-16560000 Weak transcription HMEC breast
10 chr20:16556400-16560200 Weak transcription HSMMtube muscle
11 chr20:16556400-16560200 Weak transcription NH-A brain
12 chr20:16556400-16560800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr20:16556400-16560800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr20:16556400-16561000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr20:16556400-16562400 Weak transcription Left Ventricle heart
16 chr20:16556600-16559800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr20:16556600-16559800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr20:16556600-16559800 Weak transcription Fetal Brain Male brain
19 chr20:16556600-16560000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr20:16556600-16560000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr20:16556600-16560000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr20:16556600-16560000 Weak transcription Osteobl bone
23 chr20:16556600-16560200 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr20:16556600-16560200 Weak transcription Fetal Lung lung
25 chr20:16556600-16560200 Weak transcription NHLF lung
26 chr20:16556600-16560400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr20:16556600-16560600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr20:16556600-16560600 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr20:16556600-16560600 Weak transcription HUES64 Cell Line embryonic stem cell
30 chr20:16556600-16560800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr20:16556600-16560800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr20:16556600-16560800 Weak transcription Adipose Nuclei Adipose
33 chr20:16556600-16560800 Weak transcription Colon Smooth Muscle Colon
34 chr20:16556600-16560800 Weak transcription Stomach Smooth Muscle stomach
35 chr20:16556600-16561000 Weak transcription Colonic Mucosa Colon
36 chr20:16556800-16560000 Weak transcription NHEK skin
37 chr20:16556800-16560200 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr20:16556800-16560800 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr20:16556800-16560800 Weak transcription Fetal Brain Female brain
40 chr20:16556800-16560800 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr20:16557000-16560000 Weak transcription Placenta Amnion Placenta Amnion
42 chr20:16557000-16560000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr20:16557000-16560200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr20:16557000-16560200 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr20:16557000-16560600 Weak transcription A549 lung
46 chr20:16557000-16561000 Weak transcription Fetal Muscle Leg muscle
47 chr20:16557200-16560200 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr20:16557200-16560600 Weak transcription HepG2 liver
49 chr20:16559400-16560400 Enhancers Pancreas Pancrea
50 chr20:16559400-16562000 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015