The 2.0 version of rSNPBase

Variant report

Variant rs141246836
Chromosome Location chr5:112888971-112888972
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:112850400-112904000 Weak transcription Psoas Muscle Psoas
2 chr5:112850600-112908400 Weak transcription Colonic Mucosa Colon
3 chr5:112851600-112893200 Weak transcription Fetal Brain Male brain
4 chr5:112851600-112902800 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr5:112862800-112891200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr5:112867000-112910000 Weak transcription Right Ventricle heart
7 chr5:112867200-112903400 Weak transcription Pancreas Pancrea
8 chr5:112867200-112904000 Weak transcription Lung lung
9 chr5:112867200-112904200 Weak transcription Aorta Aorta
10 chr5:112867200-112909800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr5:112867200-112909800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr5:112867200-112910000 Weak transcription Esophagus oesophagus
13 chr5:112867400-112926000 Weak transcription Small Intestine intestine
14 chr5:112867400-112933000 Weak transcription H9 Cell Line embryonic stem cell
15 chr5:112867600-112891200 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr5:112868000-112893400 Strong transcription Dnd41 blood
17 chr5:112868400-112893600 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr5:112868600-112911400 Strong transcription Primary T helper cells fromperipheralblood blood
19 chr5:112869200-112910000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr5:112870200-112930800 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr5:112872000-112904000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr5:112872000-112915000 Weak transcription Hela-S3 cervix
23 chr5:112873000-112894000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr5:112873000-112900600 Strong transcription Primary T cells fromperipheralblood blood
25 chr5:112873400-112908800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
26 chr5:112874000-112909600 Weak transcription Spleen Spleen
27 chr5:112874400-112902600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr5:112876000-112918800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr5:112877200-112905800 Weak transcription Fetal Stomach stomach
30 chr5:112877400-112892000 Weak transcription Brain Germinal Matrix brain
31 chr5:112878200-112894000 Strong transcription Primary monocytes fromperipheralblood blood
32 chr5:112879200-112890800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr5:112879600-112889000 Weak transcription H1 Cell Line embryonic stem cell
34 chr5:112879600-112895200 Weak transcription Left Ventricle heart
35 chr5:112879600-112902800 Weak transcription Thymus Thymus
36 chr5:112879600-112904200 Weak transcription Gastric stomach
37 chr5:112881800-112906400 Weak transcription Fetal Intestine Small intestine
38 chr5:112882000-112893400 Strong transcription Primary T regulatory cells fromperipheralblood blood
39 chr5:112882600-112904000 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr5:112882800-112909600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr5:112883000-112890000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr5:112883000-112899600 Weak transcription Brain Angular Gyrus brain
43 chr5:112883000-112903200 Weak transcription Rectal Smooth Muscle rectum
44 chr5:112883200-112895200 Weak transcription NHEK skin
45 chr5:112883200-112896400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:112883400-112895400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr5:112883800-112893200 Strong transcription Adipose Nuclei Adipose
48 chr5:112883800-112907400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr5:112884200-112905200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr5:112884200-112905600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015