Variant report

Variant	rs141383170
Chromosome Location	chr7:50829806-50829807
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:50825624..50829260-chr7:50829688..50833624,4	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016665	chr7:50452552-51404524	Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv824091	chr7:50828682-50885984	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:91 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:50798800-50832400	Weak transcription	HSMM	muscle
2	chr7:50798800-50837200	Weak transcription	HSMMtube	muscle
3	chr7:50807800-50834800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr7:50808000-50832400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr7:50808000-50835800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr7:50808200-50834200	Weak transcription	Brain Angular Gyrus	brain
7	chr7:50814400-50838800	Weak transcription	Adipose Nuclei	Adipose
8	chr7:50815000-50834400	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr7:50816000-50834200	Weak transcription	A549	lung
10	chr7:50816200-50831400	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr7:50816200-50834000	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr7:50816200-50849600	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr7:50816800-50833800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr7:50819400-50831800	Weak transcription	Brain Hippocampus Middle	brain
15	chr7:50819600-50833400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr7:50820200-50843000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr7:50822000-50849800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr7:50822200-50832200	Weak transcription	Fetal Muscle Trunk	muscle
19	chr7:50822200-50835000	Weak transcription	Esophagus	oesophagus
20	chr7:50822400-50834200	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr7:50822600-50831600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr7:50822800-50833800	Weak transcription	Hela-S3	cervix
23	chr7:50822800-50850200	Weak transcription	Primary hematopoietic stem cells	blood
24	chr7:50823000-50832200	Weak transcription	Brain Germinal Matrix	brain
25	chr7:50823200-50834000	Weak transcription	HUES48 Cell Line	embryonic stem cell
26	chr7:50823400-50832400	Weak transcription	Fetal Brain Female	brain
27	chr7:50823600-50830000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
28	chr7:50823600-50834800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chr7:50823600-50834800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr7:50823600-50849200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr7:50823600-50849200	Weak transcription	Fetal Lung	lung
32	chr7:50823800-50831800	Weak transcription	Fetal Stomach	stomach
33	chr7:50823800-50834600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr7:50824200-50831200	Weak transcription	Spleen	Spleen
35	chr7:50824400-50834800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr7:50824400-50843200	Weak transcription	Duodenum Mucosa	Duodenum
37	chr7:50824600-50831200	Weak transcription	Skeletal Muscle Female	skeletal muscle
38	chr7:50824800-50836400	Weak transcription	NH-A	brain
39	chr7:50825000-50832200	Weak transcription	Brain Substantia Nigra	brain
40	chr7:50826000-50830800	Weak transcription	Skeletal Muscle Male	skeletal muscle
41	chr7:50826000-50834200	Weak transcription	Brain Inferior Temporal Lobe	brain
42	chr7:50826000-50839000	Weak transcription	Ovary	ovary
43	chr7:50826400-50833200	Weak transcription	Fetal Intestine Large	intestine
44	chr7:50826400-50836200	Weak transcription	Stomach Smooth Muscle	stomach
45	chr7:50826600-50830400	Weak transcription	Fetal Intestine Small	intestine
46	chr7:50826600-50848400	Weak transcription	Duodenum Smooth Muscle	Duodenum
47	chr7:50826800-50832000	Weak transcription	Liver	Liver
48	chr7:50827400-50830000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
49	chr7:50827800-50831400	Weak transcription	Gastric	stomach
50	chr7:50828000-50831400	Weak transcription	Psoas Muscle	Psoas

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