The 2.0 version of rSNPBase

Variant report

Variant rs141447024
Chromosome Location chr3:69821966-69821967
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:69814000-69823800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr3:69814400-69823400 Weak transcription Brain Angular Gyrus brain
3 chr3:69814400-69823800 Weak transcription Fetal Muscle Trunk muscle
4 chr3:69814400-69834000 Weak transcription Right Ventricle heart
5 chr3:69814600-69824400 Enhancers Colon Smooth Muscle Colon
6 chr3:69816000-69823200 Weak transcription Right Atrium heart
7 chr3:69816000-69823400 Weak transcription Aorta Aorta
8 chr3:69816400-69822200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr3:69817600-69823200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr3:69818000-69823800 Weak transcription Brain Cingulate Gyrus brain
11 chr3:69818200-69823000 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr3:69819000-69822000 Enhancers HSMM muscle
13 chr3:69819000-69823000 Enhancers Fetal Heart heart
14 chr3:69819400-69822400 Enhancers HSMMtube muscle
15 chr3:69819400-69824600 Enhancers Skeletal Muscle Male skeletal muscle
16 chr3:69819400-69827200 Enhancers Skeletal Muscle Female skeletal muscle
17 chr3:69819600-69825800 Enhancers Rectal Smooth Muscle rectum
18 chr3:69819800-69822400 Enhancers NHLF lung
19 chr3:69820000-69824600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr3:69820400-69822600 Enhancers Psoas Muscle Psoas
21 chr3:69820600-69823200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr3:69820800-69823800 Enhancers Fetal Muscle Leg muscle
23 chr3:69820800-69825800 Weak transcription Osteobl bone
24 chr3:69820800-69826000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr3:69821000-69822400 Enhancers Duodenum Mucosa Duodenum
26 chr3:69821000-69822400 Enhancers Stomach Smooth Muscle stomach
27 chr3:69821000-69823000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr3:69821000-69823000 Weak transcription HMEC breast
29 chr3:69821000-69825800 Weak transcription Muscle Satellite Cultured Cells --
30 chr3:69821200-69823000 Weak transcription NHEK skin
31 chr3:69821200-69823200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr3:69821200-69823200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:69821200-69825600 Weak transcription HUVEC blood vessel
34 chr3:69821200-69834000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr3:69821400-69822800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr3:69821400-69823400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr3:69821600-69822200 Enhancers Brain Hippocampus Middle brain
38 chr3:69821600-69822200 Enhancers Fetal Kidney kidney
39 chr3:69821800-69822000 Enhancers Fetal Lung lung
40 chr3:69821800-69822000 Enhancers Small Intestine intestine
41 chr3:69821800-69822000 Enhancers NHDF-Ad bronchial
42 chr3:69821800-69822400 Enhancers Gastric stomach
43 chr3:69821800-69822600 Enhancers Adipose Nuclei Adipose
44 chr3:69821800-69822600 Enhancers Left Ventricle heart
45 chr3:69821800-69824400 Enhancers Ovary ovary
46 chr3:69821800-69826400 Enhancers K562 blood
47 chr3:69821800-69826800 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015