The 2.0 version of rSNPBase

Variant report

Variant rs141602811
Chromosome Location chr1:61788843-61788844
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61744600-61798600 Weak transcription Fetal Muscle Trunk muscle
2 chr1:61778400-61792800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:61784000-61790000 Enhancers Liver Liver
4 chr1:61784600-61789600 Weak transcription Right Ventricle heart
5 chr1:61784800-61789600 Weak transcription Aorta Aorta
6 chr1:61784800-61789600 Weak transcription Psoas Muscle Psoas
7 chr1:61784800-61791400 Enhancers Fetal Lung lung
8 chr1:61784800-61799400 Weak transcription Left Ventricle heart
9 chr1:61784800-61800400 Weak transcription Ovary ovary
10 chr1:61784800-61802800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:61784800-61803200 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr1:61784800-61803600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:61785000-61797200 Weak transcription HUVEC blood vessel
14 chr1:61785000-61802400 Weak transcription Primary hematopoietic stem cells blood
15 chr1:61785000-61802400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:61785600-61789800 Weak transcription Rectal Smooth Muscle rectum
17 chr1:61785600-61791200 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr1:61786000-61789600 Weak transcription Small Intestine intestine
19 chr1:61786000-61813600 Weak transcription Duodenum Mucosa Duodenum
20 chr1:61786200-61799000 Weak transcription Fetal Intestine Large intestine
21 chr1:61786400-61789600 Weak transcription Stomach Smooth Muscle stomach
22 chr1:61786400-61789800 Weak transcription Fetal Muscle Leg muscle
23 chr1:61786400-61798600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr1:61786600-61789600 Weak transcription Fetal Heart heart
25 chr1:61786600-61789800 Weak transcription Fetal Stomach stomach
26 chr1:61786600-61792400 Weak transcription Right Atrium heart
27 chr1:61786600-61799800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr1:61786600-61800400 Weak transcription Brain Anterior Caudate brain
29 chr1:61786600-61800400 Weak transcription Colon Smooth Muscle Colon
30 chr1:61786600-61800400 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:61787000-61789600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr1:61787000-61790800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:61787200-61790600 Enhancers HMEC breast
34 chr1:61787800-61789400 Enhancers Pancreatic Islets Pancreatic Islet
35 chr1:61787800-61790600 Enhancers HepG2 liver
36 chr1:61788000-61789800 Enhancers Stomach Mucosa stomach
37 chr1:61788000-61790000 Enhancers Hela-S3 cervix
38 chr1:61788000-61790600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:61788200-61789600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:61788200-61790000 Enhancers K562 blood
41 chr1:61788400-61789200 Enhancers NHEK skin
42 chr1:61788400-61789800 Weak transcription Pancreas Pancrea
43 chr1:61788400-61792200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:61788400-61800600 Weak transcription Gastric stomach
45 chr1:61788400-61802800 Weak transcription Placenta Placenta
46 chr1:61788600-61790000 Enhancers Fetal Brain Female brain
47 chr1:61788800-61790000 Enhancers A549 lung

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Last update: Aug 31, 2015