Variant report

Variant	rs141607810
Chromosome Location	chr5:167219004-167219005
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv932627	chr5:166744408-167290959	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1027805	chr5:167082800-167285008	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3440684	chr5:167217724-167219572	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167210800-167225000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr5:167211200-167219200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr5:167214600-167219800	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr5:167216800-167219200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr5:167217600-167221200	Weak transcription	Brain Anterior Caudate	brain
6	chr5:167218000-167219200	Weak transcription	NH-A	brain
7	chr5:167218000-167220200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr5:167218000-167229600	Weak transcription	HSMM	muscle
9	chr5:167218200-167221400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr5:167218200-167225000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr5:167218600-167220200	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr5:167218600-167220800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr5:167218800-167219400	Enhancers	iPS-18 Cell Line	embryonic stem cell
14	chr5:167218800-167219600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr5:167218800-167220200	Enhancers	H9 Cell Line	embryonic stem cell
16	chr5:167218800-167220600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr5:167218800-167221800	Enhancers	Cortex derived primary cultured neurospheres	brain
18	chr5:167219000-167219400	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr5:167219000-167219800	Enhancers	H1 Cell Line	embryonic stem cell
20	chr5:167219000-167220000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr5:167219000-167220200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
22	chr5:167219000-167220200	Enhancers	HUES6 Cell Line	embryonic stem cell
23	chr5:167219000-167220400	Enhancers	ES-I3 Cell Line	embryonic stem cell
24	chr5:167219000-167220400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
25	chr5:167219000-167220400	Enhancers	iPS-15b Cell Line	embryonic stem cell
26	chr5:167219000-167220400	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr5:167219000-167223200	Weak transcription	Osteobl	bone

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