Variant report

Variant	rs141627157
Chromosome Location	chr6:147212037-147212038
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:147204253..147217184-chr6:147521370..147537831,35	K562	blood:
2	chr6:147211953..147214210-chr6:147481502..147484872,3	K562	blood:
3	chr6:147210436..147217668-chr6:147521992..147527584,13	K562	blood:

Variant related genes	Relation type
ENSG00000233452	Chromatin interaction
ENSG00000164506	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830838	chr6:147090745-147274669	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	nsv442012	chr6:147210681-147219817	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147202200-147212400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr6:147207000-147213000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr6:147207400-147212400	Weak transcription	NHDF-Ad	bronchial
4	chr6:147208800-147212400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr6:147209200-147212400	Weak transcription	NHLF	lung
6	chr6:147209400-147212400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:147209400-147212600	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr6:147209400-147215600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr6:147209600-147212400	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr6:147209600-147213000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:147210000-147215200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr6:147210800-147213000	Enhancers	K562	blood
13	chr6:147211800-147214000	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr6:147211800-147214400	Enhancers	HSMM	muscle
15	chr6:147211800-147214600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr6:147212000-147212400	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr6:147212000-147212400	Enhancers	Fetal Lung	lung
18	chr6:147212000-147212600	Enhancers	HSMMtube	muscle
19	chr6:147212000-147213200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr6:147212000-147214200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr6:147212000-147215200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr6:147212000-147215800	Enhancers	Breast Myoepithelial Primary Cells	Breast

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