Variant report

Variant	rs141670221
Chromosome Location	chrX:110188711-110188712
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817233	chrX:109693720-110244649	Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv933069	chrX:110117241-110257564	Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv532899	chrX:110117241-110419226	Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv428712	chrX:110184832-110358638	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:110187000-110188800	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
2	chrX:110187000-110189800	Bivalent/Poised TSS	Fetal Brain Female	brain
3	chrX:110187000-110190200	Active TSS	Brain Germinal Matrix	brain
4	chrX:110187200-110188800	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
5	chrX:110187200-110188800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
6	chrX:110187200-110189000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
7	chrX:110187200-110189000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
8	chrX:110187400-110188800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
9	chrX:110187400-110188800	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
10	chrX:110187400-110188800	Active TSS	Brain Anterior Caudate	brain
11	chrX:110187400-110188800	Active TSS	Brain Cingulate Gyrus	brain
12	chrX:110187400-110188800	Active TSS	Pancreas	Pancrea
13	chrX:110187400-110189000	Active TSS	H9 Cell Line	embryonic stem cell
14	chrX:110187400-110189000	Active TSS	Brain Angular Gyrus	brain
15	chrX:110187600-110188800	Active TSS	Brain Inferior Temporal Lobe	brain
16	chrX:110187600-110188800	Active TSS	Fetal Brain Male	brain
17	chrX:110187800-110188800	Bivalent/Poised TSS	HMEC	breast
18	chrX:110188200-110189000	Flanking Bivalent TSS/Enh	HUES48 Cell Line	embryonic stem cell
19	chrX:110188400-110189000	Flanking Bivalent TSS/Enh	iPS-18 Cell Line	embryonic stem cell
20	chrX:110188600-110188800	Active TSS	H1 Cell Line	embryonic stem cell
21	chrX:110188600-110188800	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
22	chrX:110188600-110188800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
23	chrX:110188600-110188800	Active TSS	Cortex derived primary cultured neurospheres	brain
24	chrX:110188600-110188800	Bivalent/Poised TSS	HSMMtube	muscle
25	chrX:110188600-110189000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
26	chrX:110188600-110189000	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
27	chrX:110188600-110189400	Enhancers	Stomach Mucosa	stomach

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