Variant report
Variant | rs1416919 |
---|---|
Chromosome Location | chr6:28302884-28302885 |
allele | A/C |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:28295400-28303000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
2 | chr6:28295400-28303000 | Weak transcription | Thymus | Thymus |
3 | chr6:28297000-28303400 | Weak transcription | Gastric | stomach |
4 | chr6:28297200-28303000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
5 | chr6:28297400-28303400 | Weak transcription | Ovary | ovary |
6 | chr6:28297400-28303400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
7 | chr6:28300800-28303000 | Flanking Active TSS | K562 | blood |
8 | chr6:28301600-28303400 | Weak transcription | Lung | lung |
9 | chr6:28302200-28303000 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
10 | chr6:28302200-28303000 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
11 | chr6:28302200-28303000 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
12 | chr6:28302200-28303200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
13 | chr6:28302200-28303200 | Flanking Active TSS | Fetal Heart | heart |
14 | chr6:28302200-28305400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
15 | chr6:28302400-28303000 | Flanking Active TSS | iPS-18 Cell Line | embryonic stem cell |
16 | chr6:28302400-28303000 | Enhancers | Primary hematopoietic stem cells | blood |
17 | chr6:28302400-28303000 | Flanking Active TSS | Brain Angular Gyrus | brain |
18 | chr6:28302400-28303000 | Enhancers | Brain Cingulate Gyrus | brain |
19 | chr6:28302400-28303000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
20 | chr6:28302400-28303200 | Flanking Active TSS | HUES48 Cell Line | embryonic stem cell |
21 | chr6:28302400-28303200 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
22 | chr6:28302400-28303200 | Flanking Active TSS | Fetal Lung | lung |
23 | chr6:28302400-28303200 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
24 | chr6:28302400-28303200 | Flanking Active TSS | Rectal Smooth Muscle | rectum |
25 | chr6:28302400-28303200 | Flanking Active TSS | HepG2 | liver |
26 | chr6:28302400-28304400 | Active TSS | HSMMtube | muscle |
27 | chr6:28302400-28305200 | Active TSS | H9 Cell Line | embryonic stem cell |
28 | chr6:28302400-28305200 | Active TSS | Duodenum Smooth Muscle | Duodenum |
29 | chr6:28302400-28305600 | Active TSS | HUES64 Cell Line | embryonic stem cell |
30 | chr6:28302600-28303000 | Flanking Active TSS | H1 Cell Line | embryonic stem cell |
31 | chr6:28302600-28303000 | Flanking Active TSS | iPS-20b Cell Line | embryonic stem cell |
32 | chr6:28302600-28303000 | Enhancers | Primary T helper cells fromperipheralblood | blood |
33 | chr6:28302600-28303000 | Flanking Active TSS | Hela-S3 | cervix |
34 | chr6:28302600-28303200 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
35 | chr6:28302600-28303200 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
36 | chr6:28302600-28304200 | Active TSS | Stomach Smooth Muscle | stomach |
37 | chr6:28302600-28304600 | Active TSS | Colon Smooth Muscle | Colon |
38 | chr6:28302600-28305200 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
39 | chr6:28302600-28305200 | Active TSS | HUES6 Cell Line | embryonic stem cell |
40 | chr6:28302800-28303000 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
41 | chr6:28302800-28303000 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
42 | chr6:28302800-28303000 | Active TSS | iPS-15b Cell Line | embryonic stem cell |
43 | chr6:28302800-28303000 | Enhancers | Primary neutrophils fromperipheralblood | blood |
44 | chr6:28302800-28303000 | Enhancers | Primary B cells from peripheral blood | blood |
45 | chr6:28302800-28303000 | Enhancers | Primary T cells fromperipheralblood | blood |
46 | chr6:28302800-28303000 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
47 | chr6:28302800-28303000 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
48 | chr6:28302800-28303000 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
49 | chr6:28302800-28303000 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
50 | chr6:28302800-28303000 | Flanking Active TSS | Brain Germinal Matrix | brain |