The 2.0 version of rSNPBase

Variant report

Variant rs141697773
Chromosome Location chr2:20549872-20549873
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20547400-20550000 Flanking Active TSS Primary T cells from cord blood blood
2 chr2:20547600-20551800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
3 chr2:20547800-20550000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:20547800-20551400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr2:20548200-20550800 Active TSS Stomach Smooth Muscle stomach
6 chr2:20548400-20551000 Active TSS iPS-18 Cell Line embryonic stem cell
7 chr2:20548400-20551000 Active TSS Colonic Mucosa Colon
8 chr2:20548400-20551000 Active TSS Fetal Intestine Large intestine
9 chr2:20548400-20551200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr2:20548400-20551600 Active TSS Pancreatic Islets Pancreatic Islet
11 chr2:20548600-20550800 Active TSS Placenta Placenta
12 chr2:20548600-20551000 Active TSS H1 Cell Line embryonic stem cell
13 chr2:20548600-20551000 Active TSS HUES6 Cell Line embryonic stem cell
14 chr2:20548600-20551000 Active TSS A549 lung
15 chr2:20548600-20551000 Active TSS K562 blood
16 chr2:20548600-20551200 Active TSS iPS-20b Cell Line embryonic stem cell
17 chr2:20548600-20551200 Active TSS Breast Myoepithelial Primary Cells Breast
18 chr2:20548600-20551200 Active TSS Fetal Intestine Small intestine
19 chr2:20548600-20551200 Active TSS Fetal Thymus thymus
20 chr2:20548600-20551400 Active TSS Right Ventricle heart
21 chr2:20548600-20551600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:20548600-20551600 Active TSS Ovary ovary
23 chr2:20548600-20551800 Active TSS Thymus Thymus
24 chr2:20548800-20550000 Flanking Active TSS Primary hematopoietic stem cells blood
25 chr2:20548800-20550000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:20548800-20550000 Active TSS Right Atrium heart
27 chr2:20548800-20550200 Flanking Active TSS Primary B cells from cord blood blood
28 chr2:20548800-20550800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
29 chr2:20548800-20551000 Active TSS Primary T cells fromperipheralblood blood
30 chr2:20548800-20551000 Active TSS Fetal Brain Female brain
31 chr2:20548800-20551000 Active TSS Fetal Muscle Leg muscle
32 chr2:20548800-20551000 Active TSS Skeletal Muscle Female skeletal muscle
33 chr2:20548800-20551200 Active TSS Fetal Lung lung
34 chr2:20548800-20551200 Active TSS NHDF-Ad bronchial
35 chr2:20548800-20551400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr2:20548800-20551400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
37 chr2:20548800-20551600 Active TSS Fetal Kidney kidney
38 chr2:20548800-20551600 Active TSS Psoas Muscle Psoas
39 chr2:20549000-20550000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:20549000-20550000 Flanking Active TSS Adipose Nuclei Adipose
41 chr2:20549000-20550800 Active TSS Muscle Satellite Cultured Cells --
42 chr2:20549000-20550800 Active TSS Fetal Brain Male brain
43 chr2:20549000-20550800 Active TSS HMEC breast
44 chr2:20549000-20550800 Active TSS NH-A brain
45 chr2:20549000-20551000 Active TSS GM12878-XiMat blood
46 chr2:20549000-20551000 Active TSS HSMMtube muscle
47 chr2:20549000-20551200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:20549000-20551200 Active TSS HUES48 Cell Line embryonic stem cell
49 chr2:20549000-20551200 Active TSS Brain Hippocampus Middle brain
50 chr2:20549000-20551200 Active TSS Hela-S3 cervix

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Last update: Aug 31, 2015