Variant report

Variant	rs141708830
Chromosome Location	chr15:75323361-75323362
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:75320623..75324392-chr15:75326315..75329283,4	K562	blood:
2	chr15:75314427..75332274-chr15:75491598..75502885,56	MCF-7	breast:
3	chr15:75321516..75324460-chr15:75459942..75461573,2	MCF-7	breast:
4	chr15:75314704..75323577-chr15:75491522..75500562,29	MCF-7	breast:
5	chr15:75322075..75324448-chr15:75506120..75508117,2	MCF-7	breast:
6	chr15:75314737..75326433-chr15:75490770..75500610,30	K562	blood:
7	chr15:75312886..75327225-chr15:75491522..75500922,36	K562	blood:
8	chr15:75320936..75323384-chr15:75742999..75744813,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000169375	Chromatin interaction
ENSG00000167173	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv569993	chr15:75242155-75483752	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
2	esv3438648	chr15:75323300-75323660	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:117 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75316600-75336800	Weak transcription	Fetal Brain Female	brain
2	chr15:75316800-75338800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr15:75317200-75335000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
4	chr15:75318000-75341400	Weak transcription	Brain Germinal Matrix	brain
5	chr15:75320600-75323800	Genic enhancers	Fetal Muscle Trunk	muscle
6	chr15:75321400-75326600	Enhancers	Primary B cells from cord blood	blood
7	chr15:75321600-75324000	Enhancers	Lung	lung
8	chr15:75321600-75324800	Enhancers	HMEC	breast
9	chr15:75321800-75323400	Enhancers	Left Ventricle	heart
10	chr15:75321800-75323400	Enhancers	Ovary	ovary
11	chr15:75321800-75323600	Enhancers	Right Ventricle	heart
12	chr15:75321800-75323800	Enhancers	Esophagus	oesophagus
13	chr15:75321800-75326600	Enhancers	Fetal Thymus	thymus
14	chr15:75322000-75324400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr15:75322000-75326600	Enhancers	Placenta	Placenta
16	chr15:75322200-75323400	Enhancers	Brain Cingulate Gyrus	brain
17	chr15:75322200-75323400	Enhancers	Right Atrium	heart
18	chr15:75322200-75323400	Genic enhancers	A549	lung
19	chr15:75322200-75323600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr15:75322200-75323600	Enhancers	Rectal Mucosa Donor 29	rectum
21	chr15:75322200-75325000	Enhancers	Primary hematopoietic stem cells	blood
22	chr15:75322200-75327200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr15:75322200-75328200	Weak transcription	Primary T helper cells fromperipheralblood	blood
24	chr15:75322200-75330200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
25	chr15:75322200-75333400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
26	chr15:75322200-75335400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
27	chr15:75322200-75335400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr15:75322200-75339000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
29	chr15:75322400-75323400	Strong transcription	Primary T cells fromperipheralblood	blood
30	chr15:75322400-75323600	Weak transcription	Primary B cells from peripheral blood	blood
31	chr15:75322400-75323800	Weak transcription	Placenta Amnion	Placenta Amnion
32	chr15:75322400-75324200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
33	chr15:75322400-75328000	Enhancers	Primary monocytes fromperipheralblood	blood
34	chr15:75322400-75336800	Weak transcription	Primary T cells from cord blood	blood
35	chr15:75322400-75339200	Weak transcription	Primary T helper cells PMA-I stimulated	--
36	chr15:75322600-75323400	Transcr. at gene 5' and 3'	Primary hematopoietic stem cells short term culture	blood
37	chr15:75322600-75323400	Enhancers	Skeletal Muscle Female	skeletal muscle
38	chr15:75322600-75323600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr15:75322600-75324400	Weak transcription	HUES64 Cell Line	embryonic stem cell
40	chr15:75322600-75324400	Weak transcription	Small Intestine	intestine
41	chr15:75322600-75324600	Genic enhancers	Primary mononuclear cells fromperipheralblood	Blood
42	chr15:75322600-75324800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr15:75322600-75325000	Strong transcription	HepG2	liver
44	chr15:75322600-75325000	Enhancers	HUVEC	blood vessel
45	chr15:75322600-75326600	Enhancers	Monocytes-CD14+_RO01746	blood
46	chr15:75322600-75328400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
47	chr15:75322600-75330200	Weak transcription	NH-A	brain
48	chr15:75322600-75338600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr15:75322800-75323400	Strong transcription	H9 Cell Line	embryonic stem cell
50	chr15:75322800-75323400	Strong transcription	iPS-20b Cell Line	embryonic stem cell

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