Variant report

Variant	rs141727622
Chromosome Location	chr1:74984558-74984559
allele	-/CT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:25 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1003171	chr1:74407468-75122270	Strong transcription Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv535000	chr1:74407468-75122270	Enhancers Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv1011745	chr1:74730942-75477618	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
4	nsv535003	chr1:74730942-75477618	Flanking Active TSS Active TSS Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
5	nsv1010042	chr1:74798856-75001977	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
6	nsv1002903	chr1:74831209-74993866	Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
7	nsv830248	chr1:74962391-75144458	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
8	nsv525557	chr1:74977705-74991644	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
9	nsv1003356	chr1:74983681-75024938	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	nsv871900	chr1:74983835-75014195	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	esv2549117	chr1:74984090-74985665	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv1932816	chr1:74984346-74985458	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3320233	chr1:74984401-74985358	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3516686	chr1:74984431-74985348	Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3320236	chr1:74984436-74985367	Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3516682	chr1:74984443-74985286	Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv3320235	chr1:74984445-74985326	Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3320234	chr1:74984463-74985277	Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv3516687	chr1:74984471-74985299	Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv3516684	chr1:74984477-74985360	Weak transcription	n/a	n/a	inside rSNPs	diseases
21	esv3320232	chr1:74984506-74985258	Weak transcription	n/a	n/a	inside rSNPs	diseases
22	esv3516683	chr1:74984516-74985266	Weak transcription	n/a	n/a	inside rSNPs	diseases
23	esv3320237	chr1:74984520-74985264	Weak transcription	n/a	n/a	inside rSNPs	diseases
24	esv3516688	chr1:74984520-74985264	Weak transcription	n/a	n/a	inside rSNPs	diseases
25	esv1582651	chr1:74984557-74984558	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:74978800-74989800	Weak transcription	Right Atrium	heart
2	chr1:74979000-74986400	Weak transcription	Left Ventricle	heart
3	chr1:74979000-74986800	Weak transcription	Fetal Heart	heart
4	chr1:74979600-74987800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr1:74980000-74987800	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr1:74983600-74987200	Weak transcription	HUES6 Cell Line	embryonic stem cell

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