Variant report

Variant	rs141900584
Chromosome Location	chr8:125215225-125215226
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:125214674..125216919-chr8:125220846..125223864,3	MCF-7	breast:
2	chr8:125050056..125052985-chr8:125210899..125215246,3	MCF-7	breast:
3	chr8:125214006..125215805-chr8:125384508..125386541,2	MCF-7	breast:
4	chr8:125212588..125215990-chr8:125362115..125365671,3	MCF-7	breast:
5	chr8:125211433..125214005-chr8:125215089..125216813,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000164983	Chromatin interaction
ENSG00000254249	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831452	chr8:125099708-125259926	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv891429	chr8:125163219-125246937	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	esv2762769	chr8:125167256-125480574	Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
4	esv3414977	chr8:125214967-125215243	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125210200-125215400	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr8:125213400-125216600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:125213400-125216800	Enhancers	A549	lung
4	chr8:125213400-125219400	Weak transcription	HSMMtube	muscle
5	chr8:125213400-125219800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr8:125213400-125220000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr8:125213600-125216400	Weak transcription	NHDF-Ad	bronchial
8	chr8:125213800-125218200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr8:125213800-125220200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr8:125214400-125215800	Weak transcription	Esophagus	oesophagus
11	chr8:125214800-125216000	Weak transcription	Left Ventricle	heart
12	chr8:125214800-125216400	Weak transcription	Spleen	Spleen
13	chr8:125214800-125219600	Weak transcription	Adipose Nuclei	Adipose
14	chr8:125214800-125220000	Weak transcription	Fetal Muscle Leg	muscle
15	chr8:125214800-125220400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr8:125214800-125221200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr8:125215000-125215800	Weak transcription	Right Ventricle	heart
18	chr8:125215000-125216000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr8:125215000-125216000	Weak transcription	Right Atrium	heart
20	chr8:125215000-125220000	Weak transcription	Psoas Muscle	Psoas
21	chr8:125215200-125215400	Enhancers	Fetal Heart	heart
22	chr8:125215200-125215600	Weak transcription	Fetal Lung	lung
23	chr8:125215200-125216200	Weak transcription	HUVEC	blood vessel

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